Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

Please specify your search by selecting options from boxes. Then, click "Search" to find HLA Haplotype frequencies that match your criteria. Remember at least one option must be selected.
A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 100 (from 309) records   Pages: 1 2 3 4 of 4  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  B*39:06-C*07:02  Mexico Oaxaca Mixtec 7.0000103
 2  B*39:06-C*07:02  Mexico Mexico City Mestizo pop 2 5.7600234
 3  B*39:06-C*07:02  Mexico Oaxaca Zapotec 4.400090
 4  B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo pop 2 3.4200234
 5  B*39:06-C*07:02  Mexico Mexico City Mestizo population 2.7972143
 6  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo pop 2 2.5600234
 7  A*24:02-B*39:06-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.238867
 8  B*39:06-C*07:02  USA Hispanic pop 2 1.98201,999
 9  B*39:06-C*07:02  USA Hispanic 1.7000234
 10  A*31:01-B*39:06-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 1.6667150
 11  B*39:06-C*07:02  USA North American Native 1.6000187
 12  A*24:02-B*39:06-C*07:02-DRB1*14:06  USA Mexican American Mestizo 1.5000553
 13  B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo population 1.3986143
 14  A*24:02-B*39:06-C*07:02  USA Hispanic 1.3000234
 15  A*24:02-B*39:06-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01  Mexico Chichen Itza Maya (prehispanic) 1.063847
 16  A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01  USA NMDP Mexican or Chicano 1.0097261,235
 17  A*24:02:01-B*39:06:02-C*07:02:01  South African Mixed ancestry 1.000050
 18  B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.8600234
 19  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQA1*05:03-DQB1*03:01  Mexico Tixcacaltuyub Maya 0.746367
 20  A*68:01-B*39:06-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 21  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo population 0.6993143
 22  A*31:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo population 0.6993143
 23  B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.6993143
 24  A*24:02-B*39:06-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.6881218
 25  A*24:02:01-B*39:06:02-C*07:02:01-DRB1*03:01  Nicaragua Mestizo (G) 0.6452155
 26  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  USA Hispanic pop 2 0.53701,999
 27  A*24:02-B*39:06-C*07:02-DRB1*08:01  Russia Bering Island Aleuts 0.4808104
 28  A*29:02-B*39:06-C*07:02-E*01:03:02-F*01:01:01-G*01:01-DRB1*08:01-DQA1*04:01-DQB1*04:02  Portugal Azores Terceira Island 0.4386130
 29  B*39:06-C*07:02-DRB1*04:04-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4300234
 30  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4274234
 31  A*31:01:02-B*39:06:01-C*07:02:01-DRB1*08:04:01  Costa Rica Amerindians (G) 0.4032125
 32  A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01  USA NMDP Hispanic South or Central American 0.4026146,714
 33  A*24:02:01-B*39:06:02-C*07:02:01  England Blood Donors of Mixed Ethnicity 0.3790519
 34  A*02:01-B*39:06-C*07:02-DRB1*08:01  Italy pop 5 0.3600975
 35  A*03:01-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 36  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 37  A*24:02-B*39:06-C*07:02-DRB1*04:08-DQB1*03:01  Mexico Mexico City Mestizo population 0.3497143
 38  A*24:02-B*39:06-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 39  B*39:06-C*07:02-DRB1*04:08-DQB1*03:01  Mexico Mexico City Mestizo population 0.3497143
 40  B*39:06-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 41  A*01:01-B*39:06-C*07:02-DRB1*03:01-DQA1*05:01-DQB1*03:01  Brazil Puyanawa 0.3333150
 42  A*25:01:01-B*39:06:02-C*07:02:01-DRB1*15:01:01-DQA1*01:02:01-DQB1*06:02-DPA1*01:03:01-DPB1*03:01  Russia Belgorod region 0.3268153
 43  A*02:06:01-B*39:06:02-C*07:02:01-DRB1*14:06:01  Nicaragua Mestizo (G) 0.3226155
 44  A*24:02:01-B*39:06:02-C*07:02:01-DRB1*04:02:01  Nicaragua Mestizo (G) 0.3226155
 45  A*24:02:01-B*39:06:02-C*07:02:01-DRB1*14:54:01-DQB1*05:03:01-DPA1*01:03:01-DPB1*10:01:01  Brazil Barra Mansa Rio State Caucasian 0.3125405
 46  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:01  USA San Diego 0.2600496
 47  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQA1*01:02-DQB1*06:02-DPB1*03:01  USA San Diego 0.2600496
 48  A*24:02-B*39:06-C*07:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPB1*04:01  USA San Diego 0.2600496
 49  B*39:06-C*07:02  Italy pop 5 0.2500975
 50  A*24:02-B*39:06-C*07:02-DRB1*04:04-DQB1*03:02  USA Hispanic pop 2 0.23401,999
 51  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 52  A*24:02-B*39:06-C*07:02-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 53  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 54  A*33:01:01-B*39:06:02-C*07:02:01-DRB1*16:01:01-DQB1*06:03  Costa Rica Central Valley Mestizo (G) 0.2262221
 55  A*02:01-B*39:06-C*07:02  Italy pop 5 0.2100975
 56  A*01:01:01-B*39:06:02-C*07:02:01  England Blood Donors of Mixed Ethnicity 0.1930519
 57  A*02:01-B*39:06-C*07:02-DRB1*07:01-DQB1*03:01-DPB1*03:01  Panama 0.1900462
 58  B*39:06-C*07:02  USA African American pop 4 0.18702,411
 59  A*02:01-B*39:06-C*07:02-DRB1*15:02-DQB1*06:01  Malaysia Peninsular Indian 0.1845271
 60  A*24:02-B*39:06-C*07:02-DRB1*08:01  Germany DKMS - Netherlands minority 0.18201,374
 61  A*02:01-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  USA NMDP American Indian South or Central America 0.16235,926
 62  A*31:01-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  USA NMDP American Indian South or Central America 0.16235,926
 63  A*02:01-B*39:06-C*07:02-DRB1*08:01  Germany DKMS - United Kingdom minority 0.14401,043
 64  A*02:01-B*39:06-C*07:02-DRB1*04:03-DQB1*03:02  Italy pop 5 0.1400975
 65  A*02:01-B*39:06-C*07:02-DRB1*04:07-DQB1*03:01  Italy pop 5 0.1400975
 66  A*11:01-B*39:06-C*07:02  Italy pop 5 0.1400975
 67  A*24:02:01-B*39:06:02-C*07:02:01-DRB1*15:01:01-DQB1*06:01:01  India Kerala Malayalam speaking 0.1400356
 68  A*24:02-B*39:06-C*07:02-DRB1*04:05-DQB1*03:02  Italy pop 5 0.1400975
 69  A*24:02-B*39:06-C*07:02-DRB1*08:01-DQB1*04:02  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.13704,335
 70  A*24:02-B*39:06-C*07:02-DRB1*04:04  Germany DKMS - Spain minority 0.13601,107
 71  A*02:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  USA Hispanic pop 2 0.13301,999
 72  A*11:01-B*39:06-C*07:02-DRB1*08:01  Italy pop 5 0.1300975
 73  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  USA NMDP American Indian South or Central America 0.12845,926
 74  A*24:02-B*39:06-C*07:02-DRB1*15:01  Germany DKMS - United Kingdom minority 0.12601,043
 75  A*24:02-B*39:06-C*07:02-DRB1*08:01  Germany DKMS - Austria minority 0.11801,698
 76  A*68:01-B*39:06-C*07:02-DRB1*04:05-DQB1*03:02  USA NMDP Black South or Central American 0.11294,889
 77  A*03:01-B*39:06-C*07:02-DRB1*08:01-DQB1*04:02-DPB1*04:01  Russia Karelia 0.10801,075
 78  A*24:02-B*39:06-C*07:02-DRB1*15:01-DQB1*06:02  Colombia Bogotá Cord Blood 0.10801,463
 79  A*24:02-B*39:06-C*07:02-DRB1*08:01  Germany DKMS - France minority 0.10701,406
 80  A*02:01:01-B*39:06:02-C*07:02:01  England Blood Donors of Mixed Ethnicity 0.1024519
 81  A*03:01:01-B*39:06:02-C*07:02:01  England Blood Donors of Mixed Ethnicity 0.0963519
 82  A*32:01:01-B*39:06:02-C*07:02:01  England Blood Donors of Mixed Ethnicity 0.0963519
 83  A*24:02-B*39:06-C*07:02-DRB1*08:01  Germany DKMS - United Kingdom minority 0.09601,043
 84  A*68:01-B*39:06-C*07:02-DRB1*08:01  Germany DKMS - United Kingdom minority 0.09601,043
 85  A*24:02-B*39:06-C*07:02-DRB1*08:02-DQB1*04:02  USA Hispanic pop 2 0.09501,999
 86  A*01:01-B*39:06-C*07:02-DRB1*08:01-DQB1*04:02  USA Hispanic pop 2 0.09401,999
 87  A*24:02-B*39:06-C*07:02-DRB1*04:10-DQB1*04:02  USA Hispanic pop 2 0.09401,999
 88  A*31:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  USA Hispanic pop 2 0.09401,999
 89  A*24:02-B*39:06-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.09101,999
 90  A*01:01-B*39:06-C*07:02  Italy pop 5 0.0900975
 91  A*24:02-B*39:06-C*07:02-DRB1*04:08  Germany DKMS - Spain minority 0.09001,107
 92  A*24:02-B*39:06-C*07:02-DRB1*01:01  Germany DKMS - United Kingdom minority 0.08601,043
 93  A*01:01-B*39:06-C*07:02-DRB1*08:01  Germany DKMS - Portugal minority 0.08501,176
 94  A*02:01-B*39:06-C*07:02-DRB1*07:01  Germany DKMS - Portugal minority 0.08501,176
 95  A*24:02-B*39:06-C*07:02-DRB1*01:01  Germany DKMS - Portugal minority 0.08501,176
 96  A*24:02-B*39:06-C*07:02-DRB1*11:01  Germany DKMS - Romania minority 0.08101,234
 97  A*02:01-B*39:06-C*07:02-DRB1*08:01  Germany DKMS - Netherlands minority 0.07301,374
 98  A*29:02-B*39:06-C*07:02-DRB1*08:01  Germany DKMS - Netherlands minority 0.07301,374
 99  A*02:01-B*39:06-C*07:02-DRB1*08:01-DQA1*04:01-DQB1*04:02-DPB1*03:01  Sri Lanka Colombo 0.0700714
 100  A*68:01-B*39:06-C*07:02-DRB1*14:04-DQA1*02:01-DQB1*02:02-DPB1*26:01  Sri Lanka Colombo 0.0700714

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 309) records   Pages: 1 2 3 4 of 4  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

support@allelefrequencies.net

Valid XHTML 1.0 Transitional