The Allele Frequency Net Database [Search HLA Epitope Frequencies]

HLA Epitopes» Epitope Frequency Search » ABC

Please specify your search by selecting options from boxes. Then, click "Search" to find HLA epitope frequencies that match your criteria.

Epitope: Locus: Position: Starting Position: Ending Position:

Select specific epitopes from HLA genotype
HLA-A: HLA-B: HLA-C:

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Ethnic Origin: Sample Size: Sort by:

THIS A BETA VERSION OF HLA EPITOPE FREQUENCIES DB. NEW POPULATIONS AND FEATURES WILL SOON BE ADDED.

Visit HLA Epitope Registry for more information about HLA Epitopes (ABC)

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¹ Epitope frequencies were calculated using raw genotyping data.
² Epitope frequencies were calculated using haplotype frequencies.

Note: The aim of this search option is to display frequencies organised by population. If your selected criteria retrieves epitopes that have been found in more than one hundred populations the number of columns will be limited. For a best view please reduce the number of populations to compare.

Line

Epitope

Azores Central Islands (n=56)¹

Azores Oriental Islands (n=39)¹

Cape Verde Northwestern Islands (n=62)¹

Cape Verde Southeastern Islands (n=62)¹

England North West (n=298)¹

Ghana Ga-Adangbe (n=131)¹

Guinea Bissau (n=65)¹

Ireland Northern (n=1000)¹

Ireland South (n=250)¹

Madeira (n=185)¹

Philippines Ivatan (n=50)²

Poland DKMS (n=20653)²

Portugal Center (n=50)¹

Portugal North (n=46)¹

Portugal South (n=49)¹

Sao Tome Island Angolar (n=12)¹

Sao Tome Island Forro (n=50)¹

Saudi Arabia pop 5 (n=158)¹

Taiwan Puyuma (n=50)²

Taiwan Rukai (n=50)²

Taiwan Tao (n=50)²

Taiwan Thao (n=30)²

USA African American pop 4 (n=2411)²

USA Asian pop 2 (n=1772)²

USA Hispanic pop 2 (n=1999)²

Epitope
Freq

Mean

0.210

0.260

0.190

0.210

0.130

0.120

0.290

0.110

0.140

0.220

0.000

0.100

0.280

0.300

0.290

0.250

0.160

0.190

0.000

0.100

0.210

0.270

0.240

0.171

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Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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