Allele Frequencies in World Populations

HLA Epitopes» Epitope Frequency Search » ABC

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THIS A BETA VERSION OF HLA EPITOPE FREQUENCIES DB. NEW POPULATIONS AND FEATURES WILL SOON BE ADDED.

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Notes:

¹ Epitope frequencies were calculated using raw genotyping data.
² Epitope frequencies were calculated using haplotype frequencies.
* Distribution - Graphical distribution of the epitope.

Line Population AA Position Loci Epitope Epitope
Frequency
(in_decimals)		 Sample
Size		 Distribution*
 1  Azores Central Islands 1  9  A, B, C  9Y 56
 2  Azores Oriental Islands 1  9  A, B, C  9Y 39
 3  Cape Verde Northwestern Islands 1  9  A, B, C  9Y 62
 4  Cape Verde Southeastern Islands 1  9  A, B, C  9Y 62
 5  England North West 1  9  A, B, C  9Y 0.9600298
 6  Ghana Ga-Adangbe 1  9  A, B, C  9Y 1.0000131
 7  Guinea Bissau 1  9  A, B, C  9Y 65
 8  Ireland Northern 1  9  A, B, C  9Y 0.96001,000
 9  Ireland South 1  9  A, B, C  9Y 0.9700250
 10  Madeira 1  9  A, B, C  9Y 185
 11  Mexico City Mestizo pop 2 2  9  A, B, C  9Y 234
 12  Mexico Oaxaca Mixe 2  9  A, B, C  9Y 55
 13  Mexico Oaxaca Mixtec 2  9  A, B, C  9Y 103
 14  Philippines Ivatan 2  9  A, B, C  9Y 50
 15  Poland DKMS 2  9  A, B, C  9Y 0.980020,653
 16  Portugal Center 1  9  A, B, C  9Y 50
 17  Portugal North 1  9  A, B, C  9Y 46
 18  Portugal South 1  9  A, B, C  9Y 49
 19  Sao Tome Island Angolar 1  9  A, B, C  9Y 12
 20  Sao Tome Island Forro 1  9  A, B, C  9Y 50
 21  Saudi Arabia pop 5 1  9  A, B, C  9Y 0.8800158
 22  Taiwan Ami 2  9  A, B, C  9Y 98
 23  Taiwan Bunun 2  9  A, B, C  9Y 101
 24  Taiwan Puyuma 2  9  A, B, C  9Y 50
 25  Taiwan Rukai 2  9  A, B, C  9Y 50
 26  Taiwan Tao 2  9  A, B, C  9Y 50
 27  Taiwan Thao 2  9  A, B, C  9Y 30
 28  USA African American pop 4 2  9  A, B, C  9Y 0.99002,411
 29  USA Asian pop 2 2  9  A, B, C  9Y 1.00001,772
 30  USA Hispanic pop 2 2  9  A, B, C  9Y 0.99001,999


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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