Allele Frequencies in World Populations

HLA Epitopes» Epitope Frequency Search » ABC

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THIS A BETA VERSION OF HLA EPITOPE FREQUENCIES DB. NEW POPULATIONS AND FEATURES WILL SOON BE ADDED.

Visit HLA Epitope Registry for more information about HLA Epitopes (ABC)

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Notes:

¹ Epitope frequencies were calculated using raw genotyping data.
² Epitope frequencies were calculated using haplotype frequencies.
* Distribution - Graphical distribution of the epitope.

Line Population AA Position Loci Epitope Epitope
Frequency
(in_decimals)
Sample
Size
Distribution*
 1  Azores Central Islands 1  9  B  9H 0.390056
 2  Azores Oriental Islands 1  9  B  9H 0.330039
 3  Cape Verde Northwestern Islands 1  9  B  9H 0.320062
 4  Cape Verde Southeastern Islands 1  9  B  9H 0.270062
 5  England North West 1  9  B  9H 0.3600298
 6  Ghana Ga-Adangbe 1  9  B  9H 0.2500131
 7  Guinea Bissau 1  9  B  9H 0.400065
 8  Ireland Northern 1  9  B  9H 0.29001,000
 9  Ireland South 1  9  B  9H 0.3000250
 10  Madeira 1  9  B  9H 0.4600185
 11  Mexico City Mestizo pop 2 2  9  B  9H 0.2800234
 12  Mexico Oaxaca Mixe 2  9  B  9H 0.220055
 13  Mexico Oaxaca Mixtec 2  9  B  9H 0.1400103
 14  Philippines Ivatan 2  9  B  9H 0.630050
 15  Poland DKMS 2  9  B  9H 0.430020,653
 16  Portugal Center 1  9  B  9H 0.380050
 17  Portugal North 1  9  B  9H 0.500046
 18  Portugal South 1  9  B  9H 0.450049
 19  Sao Tome Island Angolar 1  9  B  9H 0.080012
 20  Sao Tome Island Forro 1  9  B  9H 0.160050
 21  Saudi Arabia pop 5 1  9  B  9H 0.4600158
 22  Taiwan Ami 2  9  B  9H 0.610098
 23  Taiwan Bunun 2  9  B  9H 0.4200101
 24  Taiwan Puyuma 2  9  B  9H 0.540050
 25  Taiwan Rukai 2  9  B  9H 0.540050
 26  Taiwan Tao 2  9  B  9H 0.500050
 27  Taiwan Thao 2  9  B  9H 0.440030
 28  USA African American pop 4 2  9  B  9H 0.32002,411
 29  USA African American pop 4 2  9  B  9H 0.31002,411
 30  USA Asian pop 2 2  9  B  9H 0.38001,772
 31  USA Hispanic pop 2 2  9  B  9H 0.38001,999
 32  USA Hispanic pop 2 2  9  B  9H 0.40001,999


   

Allele frequency net 2015 update: new features for HLA epitopes, KIR and disease and HLA adverse drug reaction associations.
Gonzalez-Galarza FF, Takeshita LY, Santos EJ, Kempson F, Maia MH, Silva AL, Silva AL, Ghattaoraya GS, Alfirevic A, Jones AR and Middleton D Nucleic Acid Research 2015, 39, 28, D784-8.
Liverpool, U.K.

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