The Allele Frequency Net Database [Search HLA Epitope Frequencies]

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Notes:

¹ Epitope frequencies were calculated using raw genotyping data.
² Epitope frequencies were calculated using haplotype frequencies.
* Distribution - Graphical distribution of the epitope.

Line		AA Position	Loci	Epitope	Epitope Frequency (in_decimals)	Sample Size
1	Azores Central Islands¹	69, 70, 71	B	69TNT	0.9800	56
2	Azores Oriental Islands¹	69, 70, 71	B	69TNT	0.9500	39
3	Cape Verde Northwestern Islands¹	69, 70, 71	B	69TNT	0.9400	62
4	Cape Verde Southeastern Islands¹	69, 70, 71	B	69TNT	0.9800	62
5	England North West¹	69, 70, 71	B	69TNT	0.9400	298
6	Ghana Ga-Adangbe¹	69, 70, 71	B	69TNT	0.8900	131
7	Guinea Bissau¹	69, 70, 71	B	69TNT	0.9500	65
8	Ireland Northern¹	69, 70, 71	B	69TNT	0.9300	1,000
9	Ireland South¹	69, 70, 71	B	69TNT	0.9400	250
10	Madeira¹	69, 70, 71	B	69TNT	0.9800	185
11	Mexico City Mestizo pop 2²	69, 70, 71	B	69TNT	0.9900	234
12	Mexico Oaxaca Mixe²	69, 70, 71	B	69TNT	1.0000	55
13	Mexico Oaxaca Mixtec²	69, 70, 71	B	69TNT	1.0000	103
14	Philippines Ivatan²	69, 70, 71	B	69TNT	1.0000	50
15	Poland DKMS²	69, 70, 71	B	69TNT	0.9300	20,653
16	Portugal Center¹	69, 70, 71	B	69TNT	0.9600	50
17	Portugal North¹	69, 70, 71	B	69TNT	0.9800	46
18	Portugal South¹	69, 70, 71	B	69TNT	1.0000	49
19	Sao Tome Island Angolar¹	69, 70, 71	B	69TNT	0.7500	12
20	Sao Tome Island Forro¹	69, 70, 71	B	69TNT	0.9000	50
21	Saudi Arabia pop 5¹	69, 70, 71	B	69TNT	0.9200	158
22	Taiwan Ami²	69, 70, 71	B	69TNT	0.9400	98
23	Taiwan Bunun²	69, 70, 71	B	69TNT	0.9600	101
24	Taiwan Puyuma²	69, 70, 71	B	69TNT	0.9700	50
25	Taiwan Rukai²	69, 70, 71	B	69TNT	1.0000	50
26	Taiwan Rukai²	69, 70, 71	B	69TNT	0.9900	50
27	Taiwan Tao²	69, 70, 71	B	69TNT	1.0000	50
28	Taiwan Thao²	69, 70, 71	B	69TNT	0.9700	30
29	USA African American pop 4²	69, 70, 71	B	69TNT	0.9000	2,411
30	USA African American pop 4²	69, 70, 71	B	69TNT	0.8900	2,411
31	USA Asian pop 2²	69, 70, 71	B	69TNT	0.9200	1,772
32	USA Hispanic pop 2²	69, 70, 71	B	69TNT	0.9700	1,999
33	USA Hispanic pop 2²	69, 70, 71	B	69TNT	0.9800	1,999

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Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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