Allele Frequencies in World Populations

HLA Epitopes» Epitope Frequency Search » ABC

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THIS A BETA VERSION OF HLA EPITOPE FREQUENCIES DB. NEW POPULATIONS AND FEATURES WILL SOON BE ADDED.

Visit HLA Epitope Registry for more information about HLA Epitopes (ABC)

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Notes:

¹ Epitope frequencies were calculated using raw genotyping data.
² Epitope frequencies were calculated using haplotype frequencies.
* Distribution - Graphical distribution of the epitope.

Line Population AA Position Loci Epitope Epitope
Frequency
(in_decimals)
Sample
Size
Distribution*
 1  Azores Central Islands 1  41  B, C  41T 56
 2  Azores Oriental Islands 1  41  B, C  41T 39
 3  Cape Verde Northwestern Islands 1  41  B, C  41T 62
 4  Cape Verde Southeastern Islands 1  41  B, C  41T 62
 5  England North West 1  41  B, C  41T 0.4700298
 6  Ghana Ga-Adangbe 1  41  B, C  41T 0.3000131
 7  Guinea Bissau 1  41  B, C  41T 65
 8  Ireland Northern 1  41  B, C  41T 0.52001,000
 9  Ireland South 1  41  B, C  41T 0.4500250
 10  Madeira 1  41  B, C  41T 185
 11  Mexico City Mestizo pop 2 2  41  B, C  41T 0.3100234
 12  Mexico Oaxaca Mixe 2  41  B, C  41T 0.220055
 13  Mexico Oaxaca Mixtec 2  41  B, C  41T 0.1200103
 14  Philippines Ivatan 2  41  B, C  41T 0.600050
 15  Poland DKMS 2  41  B, C  41T 0.460020,653
 16  Portugal Center 1  41  B, C  41T 50
 17  Portugal North 1  41  B, C  41T 46
 18  Portugal South 1  41  B, C  41T 49
 19  Sao Tome Island Angolar 1  41  B, C  41T 12
 20  Sao Tome Island Forro 1  41  B, C  41T 50
 21  Saudi Arabia pop 5 1  41  B, C  41T 0.4600158
 22  Taiwan Ami 2  41  B, C  41T 0.600098
 23  Taiwan Bunun 2  41  B, C  41T 0.7500101
 24  Taiwan Puyuma 2  41  B, C  41T 0.640050
 25  Taiwan Rukai 2  41  B, C  41T 0.840050
 26  Taiwan Tao 2  41  B, C  41T 0.510050
 27  Taiwan Thao 2  41  B, C  41T 0.720030
 28  USA African American pop 4 2  41  B, C  41T 0.37002,411
 29  USA African American pop 4 2  41  B, C  41T 0.36002,411
 30  USA Asian pop 2 2  41  B, C  41T 0.46001,772
 31  USA Asian pop 2 2  41  B, C  41T 0.47001,772
 32  USA Hispanic pop 2 2  41  B, C  41T 0.46001,999


   

Allele frequency net 2015 update: new features for HLA epitopes, KIR and disease and HLA adverse drug reaction associations.
Gonzalez-Galarza FF, Takeshita LY, Santos EJ, Kempson F, Maia MH, Silva AL, Silva AL, Ghattaoraya GS, Alfirevic A, Jones AR and Middleton D Nucleic Acid Research 2015, 39, 28, D784-8.
Liverpool, U.K.

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