Allele Frequencies in World Populations

HLA Epitopes» Epitope Frequency Search » ABC

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THIS A BETA VERSION OF HLA EPITOPE FREQUENCIES DB. NEW POPULATIONS AND FEATURES WILL SOON BE ADDED.

Visit HLA Epitope Registry for more information about HLA Epitopes (ABC)

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Notes:

¹ Epitope frequencies were calculated using raw genotyping data.
² Epitope frequencies were calculated using haplotype frequencies.
* Distribution - Graphical distribution of the epitope.

Line Population AA Position Loci Epitope Epitope
Frequency
(in_decimals)		 Sample
Size		 Distribution*
 1  Cape Verde Northwestern Islands 1  35  A, C  35Q 62
 2  Cape Verde Southeastern Islands 1  35  A, C  35Q 62
 3  England North West 1  35  A, C  35Q 0.2600298
 4  Ghana Ga-Adangbe 1  35  A, C  35Q 0.1500131
 5  Guinea Bissau 1  35  A, C  35Q 65
 6  Ireland Northern 1  35  A, C  35Q 0.33001,000
 7  Ireland South 1  35  A, C  35Q 0.3200250
 8  Mexico Oaxaca Mixe 2  35  A, C  35Q 55
 9  Mexico City Mestizo pop 2 2  35  A, C  35Q 234
 10  Mexico Oaxaca Mixtec 2  35  A, C  35Q 103
 11  Philippines Ivatan 2  35  A, C  35Q 0.530050
 12  Poland DKMS 2  35  A, C  35Q 0.120020,653
 13  Azores Central Islands 1  35  A, C  35Q 56
 14  Azores Oriental Islands 1  35  A, C  35Q 39
 15  Madeira 1  35  A, C  35Q 185
 16  Portugal Center 1  35  A, C  35Q 50
 17  Portugal North 1  35  A, C  35Q 46
 18  Portugal South 1  35  A, C  35Q 49
 19  Sao Tome Island Angolar 1  35  A, C  35Q 12
 20  Sao Tome Island Forro 1  35  A, C  35Q 50
 21  Saudi Arabia pop 5 1  35  A, C  35Q 0.0400158
 22  Taiwan Rukai 2  35  A, C  35Q 0.140050
 23  Taiwan Puyuma 2  35  A, C  35Q 0.510050
 24  Taiwan Tao 2  35  A, C  35Q 0.290050
 25  Taiwan Thao 2  35  A, C  35Q 0.160030
 26  Taiwan Bunun 2  35  A, C  35Q 101
 27  Taiwan Ami 2  35  A, C  35Q 98
 28  USA African American pop 4 2  35  A, C  35Q 0.17002,411
 29  USA Asian pop 2 2  35  A, C  35Q 0.18001,772
 30  USA Hispanic pop 2 2  35  A, C  35Q 0.24001,999


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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