HLA > Allele Frequency Search > Classical

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Displaying 1 to 57 (from 57) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele		 Allele
Frequency
(in_decimals)		 Sample
Size		 IMGT/HLA¹
Database		 Distribution² Haplotype³
Association		 Notesª
 1   C*12  India Kerala Adiya  0.167021See
 2   C*12  India Kerala Hindu Ezhava  0.021024See
 3   C*12  India Kerala Hindu Nair  0.085041See
 4   C*12  India Kerala Hindu Namboothiri  0.088040See
 5   C*12  India Kerala Hindu Pulaya  016See
 6   C*12  India Kerala Kanikkar  0.023022See
 7   C*12  India Kerala Kattunaikka  0.029017See
 8   C*12  India Kerala Kurichiya  010See
 9   C*12  India Kerala Kuruma  015See
 10   C*12  India Kerala Malabar Muslim  034See
 11   C*12  India Kerala Malapandaram  010See
 12   C*12  India Kerala Paniya  0.300010See
 13   C*12  India Kerala Syrian Christian  0.016031See
 14   C*12  India North Gujarat 8.6 0.0429338See
 15   C*12:02  India Delhi pop 2 13.6 0.080090See
 16   C*12:02  India New Delhi  0.063071See
 17   C*12:02  India Tamil Nadu  0.08292,492See
 18   C*12:02  India UCBB_Central Indian HLA 19.7 0.09844,204See
 19   C*12:02:01  India Andhra Pradesh Telugu Speaking 0.5 0.0027186See
 20   C*12:02:01  India Karnataka Kannada Speaking 6.9 0.0340174See
 21   C*12:02:01  India Kerala Malayalam speaking 4.8 0.0250356See
 22   C*12:02:01  India Khandesh Region Pawra  0.150050See
 23   C*12:02:01  India Mumbai Maratha  0.056091See
 24   C*12:02:01  India Tamil Nadu Nadar  0.049061See
 25   C*12:02:01  India West Bhil  0.140050See
 26   C*12:02:01  India West Coast Parsi  0.020050See
 27   C*12:02:02  India Andhra Pradesh Telugu Speaking 18.3 0.0968186See
 28   C*12:02:02  India Karnataka Kannada Speaking 5.7 0.0290174See
 29   C*12:02:02  India Kerala Malayalam speaking 6.5 0.0320356See
 30   C*12:02:03  India Khandesh Region Pawra  050See
 31   C*12:02:03  India Mumbai Maratha  091See
 32   C*12:02:03  India New Delhi  0.009071See
 33   C*12:02:03  India West Bhil  050See
 34   C*12:02:03  India West Coast Parsi  0.020050See
 35   C*12:03  India Delhi pop 2 16.0 0.080090See
 36   C*12:03  India New Delhi  0.063071See
 37   C*12:03  India North pop 2  0.015072See
 38   C*12:03  India Tamil Nadu  0.03712,492See
 39   C*12:03  India UCBB_Central Indian HLA 13.9 0.06954,204See
 40   C*12:03:01  India Andhra Pradesh Telugu Speaking 5.4 0.0296186See
 41   C*12:03:01  India Karnataka Kannada Speaking 9.8 0.0490174See
 42   C*12:03:01  India Kerala Malayalam speaking 10.1 0.0530356See
 43   C*12:04  India Tamil Nadu  0.00412,492See
 44   C*12:04  India UCBB_Central Indian HLA 0.3 0.00134,204See
 45   C*12:04:01  India Khandesh Region Pawra  050See
 46   C*12:04:01  India Mumbai Maratha  091See
 47   C*12:04:01  India West Bhil  0.070050See
 48   C*12:04:01  India West Coast Parsi  050See
 49   C*12:04:02  India Andhra Pradesh Telugu Speaking 1.6 0.0081186See
 50   C*12:04:02  India Karnataka Kannada Speaking 0.6 0.0030174See
 51   C*12:05  India UCBB_Central Indian HLA 0.0200 0.00014,204See
 52   C*12:09  India UCBB_Central Indian HLA 0.0200 0.00014,204See
 53   C*12:18  India UCBB_Central Indian HLA 0.0200 0.00014,204See
 54   C*12:98  India Tamil Nadu  0.00022,492See
 55   C*12:109  India UCBB_Central Indian HLA 0.0200 0.00014,204See
 56   C*12:159  India UCBB_Central Indian HLA 0.0200 0.00014,204See
 57   C*12:210  India UCBB_Central Indian HLA 0.0200 0.00014,204See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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