HLA > Allele Frequency Search > Classical

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Displaying 1 to 46 (from 46) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele
Allele
Frequency
(in_decimals)
Sample
Size
IMGT/HLA¹
Database
Distribution² Haplotype³
Association
Notesª
 1   B*27  India Jalpaiguri Toto 7.5 0.038240See
 2   B*27  India Kerala Adiya  021See
 3   B*27  India Kerala Kanikkar  022See
 4   B*27  India Kerala Kattunaikka  017See
 5   B*27  India Kerala Kurichiya  010See
 6   B*27  India Kerala Kuruma  015See
 7   B*27  India Kerala Malapandaram  010See
 8   B*27  India Kerala Paniya  010See
 9   B*27  India North Gujarat 5.0 0.0252338See
 10   B*27  India North pop 3  0.0190587See
 11   B*27  India sub-Himalayan West Bengal Kami 5.1 0.0253158See
 12   B*27:01  India Tamil Nadu  0.00062,492See
 13   B*27:02  India Tamil Nadu  0.00142,492See
 14   B*27:02  India UCBB_Central Indian HLA 0.0200 0.00014,204See
 15   B*27:02:01  India Karnataka Kannada Speaking 0.6 0.0030174See
 16   B*27:03  India Delhi pop 2 2.2 0.011090See
 17   B*27:03  India UCBB_Central Indian HLA 0.0200 0.00014,204See
 18   B*27:04  India Khandesh Region Pawra  0.010050See
 19   B*27:04  India Mumbai Maratha  0.025091See
 20   B*27:04  India Tamil Nadu  0.00122,492See
 21   B*27:04  India UCBB_Central Indian HLA 0.7 0.00364,204See
 22   B*27:04  India West Bhil  0.020050See
 23   B*27:04  India West Coast Parsi  050See
 24   B*27:05  India Delhi pop 2 2.2 0.011090See
 25   B*27:05  India Khandesh Region Pawra  0.040050See
 26   B*27:05  India Mumbai Maratha  091See
 27   B*27:05  India New Delhi  0.015071See
 28   B*27:05  India Tamil Nadu  0.00402,492See
 29   B*27:05  India Tamil Nadu Nadar  0.041061See
 30   B*27:05  India UCBB_Central Indian HLA 3.0 0.01524,204See
 31   B*27:05  India West Bhil  050See
 32   B*27:05  India West Coast Parsi  050See
 33   B*27:05:02  India Andhra Pradesh Telugu Speaking 0.5 0.0027186See
 34   B*27:05:02  India Kerala Malayalam speaking 0.6 0.0030356See
 35   B*27:05:02  India North pop 2  0.038072See
 36   B*27:07  India Delhi pop 2 1.1 0.005090See
 37   B*27:07  India New Delhi  0.015071See
 38   B*27:07  India North pop 2  0.019072See
 39   B*27:07  India Tamil Nadu  0.00262,492See
 40   B*27:07  India UCBB_Central Indian HLA 1.1 0.00574,204See
 41   B*27:07:01  India Karnataka Kannada Speaking 2.9 0.0140174See
 42   B*27:07:01  India Kerala Malayalam speaking 1.7 0.0080356See
 43   B*27:08  India Khandesh Region Pawra  050See
 44   B*27:08  India Mumbai Maratha  0.012091See
 45   B*27:08  India West Bhil  050See
 46   B*27:08  India West Coast Parsi  050See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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