HLA > Allele Frequency Search > Classical

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Displaying 1 to 100 (from 9,562) records   Pages: 1 2 3 4 5 6 7 8 9 10 of 96  

Line Allele Population % of individuals
that have the allele		 Allele
Frequency
(in_decimals)		 Sample
Size		 IMGT/HLA¹
Database		 Distribution² Haplotype³
Association		 Notesª
 1   A*02:17:02:01  Colombia Wayuu NA-DHS_15 (G) 6.7 (*) 0.0333 (*)15See
 2   A*01  Argentina Chiriguano 3.8 0.019054See
 3   A*01  Argentina Rosario Toba 16.3 0.081086See
 4   A*01  Argentina Salta Wichi pop 2 0.0 019See
 5   A*01  Bolivia La Paz Aymaras  0.011087See
 6   A*01  Bolivia Quechua  0.043569See
 7   A*01  Guatemala Mayan  0.0220132See
 8   A*01  Mexico Huasteca Region Teenek  055See
 9   A*01  Mexico Sinaloa Capomos Mayo Yoremes  0.008360See
 10   A*01  Peru Lamas City Lama  0.012083See
 11   A*01:01  Argentina Rosario Toba 15.1 0.076086See
 12   A*01:01  Chile Mapuche  0.061566See
 13   A*01:01  Colombia North Chimila Amerindians  0.021247See
 14   A*01:01  Colombia North Wiwa El Encanto  0.019252See
 15   A*01:01  Ecuador Amerindians  0.047663See
 16   A*01:01  Mexico Chiapas Lacandon Mayans  0.0023218See
 17   A*01:01  Mexico Mixtec  0.010097See
 18   A*01:01  Mexico Oaxaca Jamiltepec Mixtec  0.010096See
 19   A*01:01  Mexico Oaxaca Mixe  0.019055See
 20   A*01:01  Mexico Oaxaca Mixtec  0103See
 21   A*01:01  Mexico Oaxaca Zapotec  0.022090See
 22   A*01:01  Peru Titikaka Lake Uro  0.0050105See
 23   A*01:01  Peru Titikaka Lake Uros  0.0050105See
 24   A*01:01  USA Alaska Yupik  0.0040252See
 25   A*01:01  USA Arizona Gila River Amerindian  0.0040492See
 26   A*01:01  USA Arizona Pima  0.0060100See
 27   A*01:01  USA NMDP Alaska Native or Aleut  0.10501,376See
 28   A*01:01  USA NMDP American Indian South or Central America  0.11905,926See
 29   A*01:01  USA NMDP Caribean Indian  0.063014,339See
 30   A*01:01  USA NMDP North American Amerindian  0.120235,791See
 31   A*01:01  USA North American Native  0.0750187See
 32   A*01:01  USA South Dakota Lakota Sioux  0.0120302See
 33   A*01:01  Venezuela Perja Mountain Bari  0.011055See
 34   A*01:01:01  Costa Rica Amerindians (G) 4.8 (*) 0.0240 (*)125See
 35   A*01:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 8.3 0.055672See
 36   A*01:01:01  USA Arizona Gila River Pima  0.00093,000See
 37   A*01:01:01:01  Bolivia/Chile Aymara NA-DHS_13 (G) 5.0 (*) 0.0250 (*)20See
 38   A*01:01:01:01  Canada Chipewyan NA-DHS_2 (G) 8.0 (*) 0.0400 (*)25See
 39   A*01:01:01:01  Canada Cree NA-DHS_3 (G) 11.1 (*) 0.0556 (*)18See
 40   A*01:01:01:01  Canada Ojibwa NA-DHS_4 (G) 20.0 (*) 0.1000 (*)16See
 41   A*01:01:01:01  Chile Huilliche NA-DHS_14 (G) 10.0 (*) 0.0500 (*)20See
 42   A*01:01:01:01  Colombia Inga NA-DHS_11 (G) 6.7 (*) 0.0333 (*)16See
 43   A*01:01:01:01  Colombia Wayuu NA-DHS_15 (G) 6.7 (*) 0.0333 (*)15See
 44   A*01:01:01:01  Mexico Mixe NA-DHS_6 (G) 5.0 (*) 0.0250 (*)20See
 45   A*01:02  Argentina Rosario Toba 1.2 0.006086See
 46   A*01:02  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 47   A*01:02  USA Alaska Yupik  0252See
 48   A*01:02  USA NMDP Caribean Indian  0.002014,339See
 49   A*01:02  USA NMDP North American Amerindian  0.000235,791See
 50   A*01:02  USA North American Native  0187See
 51   A*01:03  USA Alaska Yupik  0252See
 52   A*01:03  USA NMDP North American Amerindian  0.000030035,791See
 53   A*01:04N  USA Alaska Yupik  0252See
 54   A*01:06  USA NMDP North American Amerindian  0.000040035,791See
 55   A*01:25  USA NMDP North American Amerindian  0.000010035,791See
 56   A*02  Argentina Chiriguano 45.3 0.264054See
 57   A*02  Argentina Rosario Toba 45.3 0.285086See
 58   A*02  Argentina Salta Wichi pop 2 47.4 0.289019See
 59   A*02  Bolivia La Paz Aymaras  0.603087See
 60   A*02  Bolivia Quechua  0.507269See
 61   A*02  Colombia Jaidukama  0.308039See
 62   A*02  Colombia Wayu from Guajira Peninsula  0.364648See
 63   A*02  Guatemala Mayan  0.3630132See
 64   A*02  Mexico Huasteca Region Teenek  0.398055See
 65   A*02  Mexico Michoacan Tarasco 58.4 0.3530130See
 66   A*02  Mexico San Vicente Tancuayalab Teenek/Huastecos  0.396253See
 67   A*02  Mexico Sinaloa Capomos Mayo Yoremes  0.441760See
 68   A*02  Peru Lamas City Lama  0.634083See
 69   A*02:01  Argentina Gran Chaco Eastern Toba 46.4 0.3040135See
 70   A*02:01  Argentina Gran Chaco Mataco Wichi 40.9 0.216049See
 71   A*02:01  Argentina Gran Chaco Western Toba Pilaga 60.0 0.400019See
 72   A*02:01  Argentina Rosario Toba 34.9 0.192086See
 73   A*02:01  Brazil Terena 38.3 0.208060See
 74   A*02:01  Chile Easter Island  0.095021See
 75   A*02:01  Chile Mapuche  0.223866See
 76   A*02:01  Colombia North Chimila Amerindians  0.063847See
 77   A*02:01  Colombia North Wiwa El Encanto  0.105852See
 78   A*02:01  Ecuador Amerindians  0.254063See
 79   A*02:01  Ecuador Cayapa  0.0900183See
 80   A*02:01  Mexico Chiapas Lacandon Mayans  0.0940218See
 81   A*02:01  Mexico Chichen Itza Maya (prehispanic)  0.074547See
 82   A*02:01  Mexico Mixtec  0.253097See
 83   A*02:01  Mexico Oaxaca Jamiltepec Mixtec  0.255096See
 84   A*02:01  Mexico Oaxaca Mixe  0.311055See
 85   A*02:01  Mexico Oaxaca Mixtec  0.2840103See
 86   A*02:01  Mexico Oaxaca Zapotec  0.284090See
 87   A*02:01  Mexico Sonora Seri  0.545034See
 88   A*02:01  Mexico Tixcacaltuyub Maya  0.029967See
 89   A*02:01  Peru Titikaka Lake Uro  0.5000105See
 90   A*02:01  Peru Titikaka Lake Uros  0.5000105See
 91   A*02:01  USA Alaska Yupik  0.0240252See
 92   A*02:01  USA Arizona Gila River Amerindian  0.4740492See
 93   A*02:01  USA Arizona Pima  0.4360100See
 94   A*02:01  USA NMDP Alaska Native or Aleut  0.19201,376See
 95   A*02:01  USA NMDP American Indian South or Central America  0.26505,926See
 96   A*02:01  USA NMDP Caribean Indian  0.145014,339See
 97   A*02:01  USA NMDP North American Amerindian  0.277635,791See
 98   A*02:01  USA North American Native  0.2170187See
 99   A*02:01  USA South Dakota Lakota Sioux  0.2970302See
 100   A*02:01  Venezuela Perja Mountain Bari  0.216055See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.


Displaying 1 to 100 (from 9,562) records   Pages: 1 2 3 4 5 6 7 8 9 10 of 96  





   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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