Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 100 (from 156) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*02:06-B*40:01  Taiwan Puyuma 4.000050
 2  A*02:06-B*40:01-DRB1*14:02-DQB1*03:01  USA South Dakota Lakota Sioux 2.9000302
 3  A*02:06-B*40:01  Philippines Ivatan 2.300050
 4  A*02:06-B*40:01  Taiwan Atayal 2.1000106
 5  A*02:06-B*40:01  Taiwan Siraya 2.000051
 6  A*02:06-B*40:01  Taiwan Taroko 1.100055
 7  A*02:06-B*40:01-DRB1*04:03  New Zealand Maori with Full Ancestry 1.100046
 8  A*02:06-B*40:01-C*03:04-DRB1*15:01-DQB1*06:02  USA NMDP Hawaiian or other Pacific Islander 0.913711,499
 9  A*02:06-B*40:01-C*03:04-DRB1*09:01-DQB1*03:03  USA NMDP Hawaiian or other Pacific Islander 0.542611,499
 10  A*02:06:01-B*40:01:01-DRB1*12:02:01  China Jingpo Minority 0.5210105
 11  A*02:06:01-B*40:01:02-C*03:04:01-DRB1*12:02:01-DQB1*03:01:01  Vietnam Kinh 0.4950101
 12  A*02:06-B*40:01-DRB1*04:03  New Zealand Maori with Admixed History 0.4762105
 13  A*02:06-B*40:01  USA Asian pop 2 0.31001,772
 14  A*02:06-B*40:01-C*03:04-DRB1*12:01-DQA1*03:01-DQB1*03:02-DPB1*03:01  USA San Diego 0.2600496
 15  A*02:06-B*40:01-C*03:04-DRB1*14:02-DQB1*03:01  USA NMDP Alaska Native or Aleut 0.21241,376
 16  A*02:06-B*40:01-C*04:01-DRB1*04:03-DQB1*03:02  USA NMDP Hawaiian or other Pacific Islander 0.184711,499
 17  A*02:06-B*40:01-C*03:04-DRB1*15:01  Germany DKMS - China minority 0.13701,282
 18  A*02:06-B*40:01-C*03:04-DRB1*08:03-DQB1*06:01  USA Asian pop 2 0.12901,772
 19  A*02:06-B*40:01-DRB1*09:01  Hong Kong Chinese cord blood registry 0.10503,892
 20  A*02:06-B*40:01-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.10003,078
 21  A*02:06-B*40:01-C*03:04-DRB1*04:05  Japan pop 16 0.094018,604
 22  A*02:06-B*40:01-DRB1*16:02  Hong Kong Chinese cord blood registry 0.09103,892
 23  A*02:06-B*40:01-C*07:02-DRB1*09:01  Hong Kong Chinese BMDR 0.07277,595
 24  A*02:06:01-B*40:01:02-C*07:02:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.06385,266
 25  A*02:06:01-B*40:01:02-C*07:02:01-DRB1*08:03:02-DQB1*06:01:01  China Zhejiang Han 0.06061,734
 26  A*02:06:01-B*40:01:02-C*03:04:01-DRB1*04:05:01-DQB1*04:01:01  China Zhejiang Han 0.05771,734
 27  A*02:06-B*40:01-C*03:04-DRB1*09:01  Japan pop 16 0.057018,604
 28  A*02:06-B*40:01-C*03:04-DRB1*15:01-DQB1*06:02  Malaysia Peninsular Malay 0.0526951
 29  A*02:06-B*40:01-C*03:04-DRB1*08:03  Japan pop 16 0.047018,604
 30  A*02:06-B*40:01-DRB1*12:01  Hong Kong Chinese cord blood registry 0.04443,892
 31  A*02:06-B*40:01-C*03:04-DRB1*11:01-DQB1*03:01  USA Asian pop 2 0.04401,772
 32  A*02:06-B*40:01-C*03:04-DRB1*14:05-DQB1*05:03  USA Asian pop 2 0.04401,772
 33  A*02:06-B*40:01-C*07:02-DRB1*04:05-DQB1*04:01  USA Asian pop 2 0.04401,772
 34  A*02:06-B*40:01-C*07:02-DRB1*11:01  Germany DKMS - China minority 0.04401,282
 35  A*02:06-B*40:01-C*07:02-DRB1*11:01-DQB1*03:01  USA Asian pop 2 0.04401,772
 36  A*02:06:01-B*40:01:02-C*03:04:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.04331,734
 37  A*02:06-B*40:01-DRB1*15:01  Hong Kong Chinese cord blood registry 0.04273,892
 38  A*02:06-B*40:01-C*03:04-DRB1*15:01-DQB1*06:01  India East UCBB 0.04162,403
 39  A*02:06-B*40:01-C*03:04-DRB1*08:03  Germany DKMS - China minority 0.03901,282
 40  A*02:06-B*40:01-C*15:02-DRB1*04:05  Japan pop 16 0.037018,604
 41  A*02:06-B*40:01-C*03:04-DRB1*04:04  Germany DKMS - France minority 0.03601,406
 42  A*02:06:01-B*40:01:02-C*03:04:01-DRB1*08:03:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.03585,266
 43  A*02:06-B*40:01-C*07:02-DRB1*12:01  Hong Kong Chinese BMDR 0.03537,595
 44  A*02:06-B*40:01-C*07:02-DRB1*15:01  Hong Kong Chinese BMDR 0.03467,595
 45  A*02:06-B*40:01-C*03:04-DRB1*09:01  Hong Kong Chinese BMDR 0.03357,595
 46  A*02:06-B*40:01-C*07:02-DRB1*12:02  Hong Kong Chinese BMDR 0.03277,595
 47  A*02:06-B*40:01-DRB1*04:05  Hong Kong Chinese cord blood registry 0.03223,892
 48  A*02:06-B*40:01-C*03:04-DRB1*15:01  Hong Kong Chinese BMDR 0.03217,595
 49  A*02:06-B*40:01-C*07:02-DRB1*12:01  Japan pop 16 0.031018,604
 50  A*02:06-B*40:01-C*03:03-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 51  A*02:06-B*40:01-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 52  A*02:06-B*40:01-C*03:04-DRB1*08:03-DQA1*01:03-DQB1*06:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 53  A*02:06-B*40:01-C*03:04-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:01-DPB1*05:01  Japan pop 17 0.03003,078
 54  A*02:06-B*40:01-C*03:04-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 55  A*02:06-B*40:01-C*03:04-DRB1*12:01-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 56  A*02:06-B*40:01-C*03:04-DRB1*12:02-DQA1*06:01-DQB1*03:01-DPA1*02:01-DPB1*05:01  Japan pop 17 0.03003,078
 57  A*02:06-B*40:01-C*07:02-DRB1*12:01-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*06:01  Japan pop 17 0.03003,078
 58  A*02:06-B*40:01-C*15:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 59  A*02:06-B*40:01-C*15:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 60  A*02:06-B*40:01-C*15:02-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 61  A*02:06:01-B*40:01:02-C*07:02:01-DRB1*15:01:01-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.02935,266
 62  A*02:06-B*40:01-C*03:04-DRB1*13:02  Germany DKMS - Austria minority 0.02901,698
 63  A*02:06:01-B*40:01:02-C*03:03:01-DRB1*11:01:01-DQB1*03:01:01  China Zhejiang Han 0.02881,734
 64  A*02:06:01-B*40:01:02-C*03:04:01-DRB1*04:06:01-DQB1*05:02:01  China Zhejiang Han 0.02881,734
 65  A*02:06:01-B*40:01:02-C*03:04:01-DRB1*14:05:01-DQB1*05:03:01  China Zhejiang Han 0.02881,734
 66  A*02:06:01-B*40:01:02-C*04:82-DRB1*11:01:01-DQB1*03:01:01  China Zhejiang Han 0.02881,734
 67  A*02:06:01-B*40:01:02-C*07:02:01-DRB1*12:01:01-DQB1*06:01:01  China Zhejiang Han 0.02881,734
 68  A*02:06:01-B*40:01:02-C*07:02:01-DRB1*14:54:01-DQB1*05:02:01  China Zhejiang Han 0.02881,734
 69  A*02:06:01-B*40:01:02-C*14:02:01-DRB1*12:01:01-DQB1*03:01:01  China Zhejiang Han 0.02881,734
 70  A*02:06:01-B*40:01:02-C*07:02:01-DRB1*12:01:01-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02875,266
 71  A*02:06-B*40:01-DRB1*08:03  Hong Kong Chinese cord blood registry 0.02763,892
 72  A*02:06:01-B*40:01:02-C*07:02:01-DRB1*11:01:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02705,266
 73  A*02:06:01-B*40:01:02-C*03:04:01-DRB1*16:02:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02615,266
 74  A*02:06-B*40:01-C*03:04-DRB1*14:54  Japan pop 16 0.026018,604
 75  A*02:06-B*40:01-C*03:04-DRB1*04:05  Hong Kong Chinese BMDR 0.02567,595
 76  A*02:06-B*40:01-C*07:02-DRB1*04:03  Hong Kong Chinese BMDR 0.02267,595
 77  A*02:06-B*40:01-C*03:04-DRB1*04:03  Hong Kong Chinese BMDR 0.02087,595
 78  A*02:06-B*40:01-C*03:04-DRB1*07:01-DQB1*03:03  India East UCBB 0.02082,403
 79  A*02:06-B*40:01-C*03:04-DRB1*15:06-DQB1*05:02  India East UCBB 0.02082,403
 80  A*02:06-B*40:01-C*07:02-DRB1*04:05  Hong Kong Chinese BMDR 0.02087,595
 81  A*02:06-B*40:01-DRB1*11:01  Hong Kong Chinese cord blood registry 0.02023,892
 82  A*02:06-B*40:01-C*02:02-DRB1*10:01-DQB1*05:01  India Tamil Nadu 0.02012,492
 83  A*02:06-B*40:01-C*02:02-DRB1*10:02-DQB1*05:01  India Tamil Nadu 0.02012,492
 84  A*02:06:01-B*40:01:02-C*15:02:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01905,266
 85  A*02:06:01-B*40:01:02-C*07:02:01-DRB1*08:09:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01895,266
 86  A*02:06:01-B*40:01:02-C*07:02:01-DRB1*12:01:01-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.01825,266
 87  A*02:06-B*40:01-C*03:03-DRB1*09:01  Japan pop 16 0.016018,604
 88  A*02:06-B*40:01-C*03:03-DRB1*15:01  Japan pop 16 0.016018,604
 89  A*02:06-B*40:01-C*15:02-DRB1*15:01  Japan pop 16 0.016018,604
 90  A*02:06-B*40:01-C*03:04-DRB1*12:01  Hong Kong Chinese BMDR 0.01597,595
 91  A*02:06:01-B*40:01:02-C*07:02:01-DRB1*08:03:02-DPB1*13:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01575,266
 92  A*02:06:01-B*40:01:02-C*07:02:01-DRB1*04:05:01-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.01425,266
 93  A*02:06-B*40:01-C*04:01-DRB1*04:03  Hong Kong Chinese BMDR 0.01337,595
 94  A*02:06-B*40:01-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.01327,595
 95  A*02:06:01-B*40:01:02-C*03:04:01-DRB1*11:01:01-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01315,266
 96  A*02:06:01-B*40:01:02-C*07:02:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01315,266
 97  A*02:06-B*40:01-C*03:03-DRB1*16:02  Hong Kong Chinese BMDR 0.01197,595
 98  A*02:06-B*40:01-C*03:04-DRB1*04:03-DQB1*03:02  India Central UCBB 0.01194,204
 99  A*02:06-B*40:01-C*12:03-DRB1*15:01-DQB1*06:01  India Central UCBB 0.01194,204
 100  A*02:06-B*40:01-C*03:04-DRB1*14:05  Hong Kong Chinese BMDR 0.01087,595

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 156) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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