Allele Frequencies in World Populations

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Line Allele Population % of individuals
that have the allele
Allele
Frequency
Sample
Size
Location
1DQA1*05:01USA Arizona Pima pop20.94101833_0_N_113_0_W
2DQA1*05:01USA Arizona Gila River Amerindian0.889049233_4_N_111_44_W
3DQA1*05:01Colombia North Eastern Plains Sikuani0.7780276_11_N_67_28_W
4DQA1*05:01Colombia East Amazon Region Nukak0.7250202_34_N_72_38_W
5DQA1*05:01Colombia West Waunana0.6170303_25_N_76_31_W
6DQA1*05:01Brazil Central Plateau Xavante0.61407415_35_S_56_5_W
7DQA1*05:01Argentina Chiriguano89.30.59805423_8_S_64_20_W
8DQA1*05:01Brazil Guarani Nandeva0.59308623_0_S_54_0_W
9DQA1*05:01USA New Mexico Zuni0.58005135_4_N_108_9_W
10DQA1*05:01Colombia West Embera0.5500202_26_N_76_37_W
11DQA1*05:01Brazil Guarani Kaiowa0.548015523_0_S_55_0_W
12DQA1*05:01Brazil Guarani M bya0.54809325_0_S_52_0_W
13DQA1*05:01Papua New Guinea Madang0.5230655_13_S_145_48_E
14DQA1*05:01Croatia Krk Island Vrbnik0.51802845_5_N_14_34_E
15DQA1*05:01USA New Mexico Canoncito Navajo0.48804234_9_N_107_3_W
16DQA1*05:01Canada British Columbia Athabaskan0.47606254_0_N_125_0_W
17DQA1*05:01Costa Rica and Panama Mestizo0.4700569_56_N_84_5_W
18DQA1*05:01Argentina Gran Chaco Mataco Wichi0.46004927_27_S_58_59_W
19DQA1*05:01Mexico Oaxaca Mixe0.43605517_5_N_96_45_W
20DQA1*05:01Greece69.00.42704837_58_N_23_43_E
21DQA1*05:01Argentina Gran Chaco Eastern Toba0.410013526_11_S_58_11_W
22DQA1*05:01Italy Central0.408038041_54_N_12_30_E
23DQA1*05:01Argentina Gran Chaco Western Toba Pilaga0.40601927_27_S_58_59_W
24DQA1*05:01Gambia0.401014613_28_N_16_0_W
25DQA1*05:01Greece pop263.40.395012037_58_N_23_43_E
26DQA1*05:01Argentina Salta Wichi pop 263.20.39501923_8_S_64_20_W
27DQA1*05:01Fiji Viti Levu Island0.39505717_48_S_178_0_E
28DQA1*05:01Iran Kurd0.395010035_19_N_46_59_E
29DQA1*05:01Russia Siberia Ulchi0.38407352_0_N_136_0_E
30DQA1*05:01Papua New Guinea East New Britain Rabaul0.3830604_12_S_152_11_E
31DQA1*05:01Greece pop361.924637_58_N_23_43_E
32DQA1*05:01Argentina Mapuche0.38204838_57_S_68_14_W
33DQA1*05:01Iran Azeri0.380010036_37_N_48_25_E
34DQA1*05:01Greece pop 40.37809837_58_N_23_43_E
35DQA1*05:01Niue0.37807019_3_S_169_55_W
36DQA1*05:01Croatia Krk Island0.373021245_4_N_14_36_E
37DQA1*05:01Cook Islands Rarotonga0.37207821_14_S_159_47_W
38DQA1*05:01Italy pop 20.36805341_54_N_12_30_E
39DQA1*05:01Mexico Nuevo Leon Mestizo62.50.36304025_40_N_100_18_W
40DQA1*05:01Mexico Guanajuato and Jalisco Mestizo72.30.361010121_6_N_101_16_W
41DQA1*05:01Iran Baloch0.355010029_29_N_60_52_E
42DQA1*05:01Russia Siberia Chukchi0.35507166_0_N_172_0_W
43DQA1*05:01Russia Siberia Dudinka Nganasan0.35402469_24_N_86_11_E
44DQA1*05:01Colombia Sierra Nevada de Santa Marta Arsario0.35001811_14_N_74_12_W
45DQA1*05:01Iran Fars Parsi0.34907327_36_N_52_30_E
46DQA1*05:01Greece Crete0.347013535_0_N_25_0_E
47DQA1*05:01Georgia Svaneti Region Svan0.33808042_54_N_43_0_E
48DQA1*05:01Turkey pop 10.334025040_0_N_28_0_E
49DQA1*05:01New Caledonia0.33106521_0_S_165_0_E
50DQA1*05:01Italy pop 30.330017941_42_N_15_44_E
51DQA1*05:01Russia Siberia Irkutsk Tofalar0.32604352_17_N_104_18_E
52DQA1*05:01Macedonia pop 50.325010342_0_N_21_26_E
53DQA1*05:01France Lille0.32109546_0_N_2_0_E
54DQA1*05:01USA Hawaii0.32103921_18_N_157_47_W
55DQA1*05:01Slovenia pop 253.614046_3_N_14_30_E
56DQA1*05:01Czech Republic pop 253.59950_5_N_14_28_E
57DQA1*05:01Western Samoa and Tokelau0.3140519_10_S_171_50_W
58DQA1*05:01Australia Kimberly Aborigine0.30504115_46_S_128_44_E
59DQA1*05:01Croatia Krk Island Dobrinj0.30402845_5_N_14_34_E
60DQA1*05:01Croatia Krk Island Dubasnica0.30402345_5_N_14_34_E
61DQA1*05:01Mexico Oaxaca Mixtec0.302010317_5_N_96_45_W
62DQA1*05:01Mexico Oaxaca Zapotec0.30009017_5_N_96_45_W
63DQA1*05:01Russia Siberia Sulamai Ket0.30002260_1_N_93_4_E
64DQA1*05:01China Urumqi Kazak0.29804243_48_N_87_35_E
65DQA1*05:01England pop 345.80.29706151_30_N_0_7_W
66DQA1*05:01Russia Tuva Todja0.29502251_30_N_95_5_E
67DQA1*05:01Russia Siberia Lower Yenisey Ket0.29401759_12_N_88_34_E
68DQA1*05:01Colombia Northwest Tule0.2930298_5_N_76_43_W
69DQA1*05:01Turkey pop 30.29005041_1_N_28_54_E
70DQA1*05:01China, Xinjiang Uyghur Autonomous Region Kazakh48.10.28855243_77_N_87_68_E
71DQA1*05:01Israel Ashkenazi Jews pop 20.288013231_47_N_35_13_E
72DQA1*05:01Morocco Souss Region0.28609830_28_N_8_52_W
73DQA1*05:01Russia Siberia Eskimo0.28607066_0_N_172_0_W
74DQA1*05:01USA South Dakota Sioux0.286010145_0_N_100_0_W
75DQA1*05:01Peru Quechua0.28404413_38_S_72_53_W
76DQA1*05:01Spain Murcia0.282017337_59_N_1_7_W
77DQA1*05:01Kenya, Nyanza Province, Luo tribe47.00.28001000_5_S_34_46_E
78DQA1*05:01Croatia Gorski Kotar Region0.27806345_29_N_15_33_E
79DQA1*05:01Taiwan0.27706523_46_N_121_0_E
80DQA1*05:01Brazil Ticuna0.2760505_0_S_70_0_W
81DQA1*05:01Mexico Highlands Mestizos46.90.272016019_25_N_99_7_W
82DQA1*05:01Algeria pop 247.010636_42_N_3_13_E
83DQA1*05:01Colombia Guajira Peninsula Wayuu0.27008811_51_N_72_2_W
84DQA1*05:01Spain Gipuzkoa Basque0.270010043_10_N_2_10_W
85DQA1*05:01Russia Northwest Slavic0.265020058_0_N_28_0_E
86DQA1*05:01Germany pop 345.911150_48_N_8_46_E
87DQA1*05:01Spain Catalonia Girona0.26408841_59_N_2_49_E
88DQA1*05:01Germany Essen46.00.262017451_27_N_7_0_E
89DQA1*05:01Czech Republic0.262010650_0_N_14_0_E
90DQA1*05:01USA San Francisco Caucasian0.261022037_46_N_122_25_W
91DQA1*05:01Russia Siberia Chukotka Peninsula Eskimo0.26008066_0_N_172_0_W
92DQA1*05:01Russia Tuva pop 20.260016951_30_N_95_5_E
93DQA1*05:01Russia Tuva0.259019051_47_N_94_41_E
94DQA1*05:01Israel Moroccan Jews0.256011331_47_N_35_13_E
95DQA1*05:01Russia Nenet Mixed0.25505567_5_N_52_0_E
96DQA1*05:01Poland Lodz0.247010351_45_N_19_28_E
97DQA1*05:01China, Xinjiang Uyghur Autonomous Region Uyghur43.70.24657143_77_N_87_68_E
98DQA1*05:01France South0.243035043_36_N_1_26_E
99DQA1*05:01Russia Tuva pop30.23904451_30_N_95_5_E
100DQA1*05:01USA Caucasian Bethesda40.90.234030738_0_N_78_0_W
101DQA1*05:01Mexico Mayan0.23301620_0_N_90_0_W
102DQA1*05:01Ecuador Cayapa0.23201831_3_N_79_12_W
103DQA1*05:01Russia Siberia Negidal0.22903551_0_N_131_4_E
104DQA1*05:01Sweden0.22709959_21_N_18_4_E
105DQA1*05:01Colombia West Cauca0.2250204_26_N_75_14_W
106DQA1*05:01Mexico Guadalajara Mestizo0.22205420_40_N_103_21_W
107DQA1*05:01France Ceph0.221012444_0_N_0_0_E
108DQA1*05:01England pop 638.40.220017751_30_N_0_7_W
109DQA1*05:01Norway0.220018159_56_N_10_45_E
110DQA1*05:01Poland Wielkopolska Region0.21709952_12_N_19_41_E
111DQA1*05:01India North pop 20.21507225_0_N_74_0_E
112DQA1*05:01Iran Yazd Zoroastrian0.21506531_54_N_54_22_E
113DQA1*05:01Russia Siberia Khanty Mansi0.21306861_0_N_69_0_E
114DQA1*05:01Portugal Center pop 20.212056240_11_N_8_26_W
115DQA1*05:01Sweden Northern Sami0.212015467_0_N_18_30_E
116DQA1*05:01Russia Siberia Gvaysugi Udege0.21002543_8_N_131_54_E
117DQA1*05:01Ethiopia Amhara0.2090989_1_N_38_44_E
118DQA1*05:01Brazil North East Mixed0.20702058_0_S_40_0_W
119DQA1*05:01China Xinjiang Province Uyghur0.20709240_42_N_85_38_E
120DQA1*05:01Ecuador African0.2070582_0_S_77_0_W
121DQA1*05:01Nicaragua Managua36.70.205133912_7_N_86_10_W
122DQA1*05:01Colombia Northwest Choco0.2000205_42_N_76_40_W
123DQA1*05:01Russia Arkhangelsk Pomor0.19906364_0_N_64_0_E
124DQA1*05:01Jamaica0.197013217_59_N_76_49_W
125DQA1*05:01Mexico Mayan pop 20.194016316_45_N_91_7_W
126DQA1*05:01Spain Navarre Basques0.192011643_8_N_1_31_W
127DQA1*05:01India Uttar Pradesh0.190020226_50_N_80_54_E
128DQA1*05:01Russia Siberia Chukotka Peninsula Chukchi0.19005966_0_N_172_0_W
129DQA1*05:01USA African American Bethesda34.10.188018738_0_N_78_0_W
130DQA1*05:01India Lucknow35.00.186012326_27_N_80_14_E
131DQA1*05:01Scotland Orkney35.60.18509958_59_N_3_11_W
132DQA1*05:01China Canton Han0.184026423_6_N_113_15_E
133DQA1*05:01Colombia Providencia Island African0.18303013_20_N_81_22_W
134DQA1*05:01Zimbabwe Harare Shona0.183023017_51_S_31_1_E
135DQA1*05:01Mexico Sonora Seri0.18203428_57_N_112_34_W
136DQA1*05:01China Beijing and Xian0.181017139_58_N_116_24_E
137DQA1*05:01Ethiopia Oromo0.1810839_1_N_38_44_E
138DQA1*05:01Brazil Kaingang0.180023524_30_S_51_40_W
139DQA1*05:01Russia Siberia Khabarovsk Evenki0.18002548_29_N_135_4_E
140DQA1*05:01Russia Murmansk Saomi Mixed0.17907068_58_N_33_5_E
141DQA1*05:01China Urumqi Han0.17805943_48_N_87_35_E
142DQA1*05:01Gabon Haut-Ogooue Dienga0.17701671_38_S_13_35_E
143DQA1*05:01South Africa Worcester31.00.173015933_39_S_19_27_E
144DQA1*05:01Tunisia31.50.172010035_0_N_9_0_E
145DQA1*05:01Jordan Amman0.172014631_35_N_36_20_E
146DQA1*05:01China, Xinjiang Uyghur Autonomous Region Han32.90.17147043_77_N_87_68_E
147DQA1*05:01Spain Las Alpujarras0.17068536_56_N_3_20_W
148DQA1*05:01Russia Siberia North East Kamchatka Koryak0.17009260_19_N_165_50_E
149DQA1*05:01Chile Santiago pop 20.169012433_26_S_70_39_W
150DQA1*05:01India Northeast Sunni0.167018826_48_N_80_54_E
151DQA1*05:01Sweden Southern Sami0.167013060_52_N_14_44_E
152DQA1*05:01India Northeast Vaish0.166019826_48_N_80_54_E
153DQA1*05:01India Bombay0.16105918_58_N_72_49_E
154DQA1*05:01Cameroon0.15801263_52_N_11_31_E
155DQA1*05:01United Arab Emirates Abu Dhabi0.15385224_28_N_54_22_E
156DQA1*05:01USA San Diego29.40.152049632_50_N_117_15_W
157DQA1*05:01China Hong Kong and Singapore0.152013522_18_N_114_12_E
158DQA1*05:01Italy Rome27.60.151010041_54_N_12_27_E
159DQA1*05:01China, Xinjiang Uyghur Autonomous Region Hui30.00.15004043_77_N_87_68_E
160DQA1*05:01Thailand pop 20.149012413_45_N_100_29_E
161DQA1*05:01Colombia Sierra Nevada de Santa Marta Kogi pop 30.14503110_52_N_73_43_W
162DQA1*05:01Denmark0.14505555_43_N_12_34_E
163DQA1*05:01Czech Republic Romani26.53450_5_N_14_28_E
164DQA1*05:01India Northeast Rajbanshi0.14209822_33_N_88_20_E
165DQA1*05:01Russia Siberia NW of Sakhalin Island Nivkh0.14003251_0_N_143_0_E
166DQA1*05:01Russia Siberia Polygus Evenk0.14003560_0_N_98_0_E
167DQA1*05:01Congo Kinshasa Bantu25.60.1390900_4_N_18_16_E
168DQA1*05:01India Northeast Kayastha0.139019026_48_N_80_54_E
169DQA1*05:01China Harbin Manchu pop 20.13805045_45_N_126_38_E
170DQA1*05:01Colombia Sierra Nevada de Santa Marta Arhuaco0.138010711_14_N_74_12_W
171DQA1*05:01Paraguay Aché0.13808723_30_S_55_50_W
172DQA1*05:01Cameroon Saa0.13701724_0_N_9_0_E
173DQA1*05:01Thailand0.137014216_7_N_102_0_E
174DQA1*05:01Colombia Sierra Nevada de Santa Marta Kogi0.13404211_14_N_74_12_W
175DQA1*05:01Australia Cape York Peninsula Aborigine0.131010310_41_S_142_32_E
176DQA1*05:01India Northeast Shia0.129019026_48_N_80_54_E
177DQA1*05:01Morocco Settat Chaouya25.20.12609833_0_N_7_36_W
178DQA1*05:01Morocco Atlantic Coast Chaouya0.12609830_22_N_7_22_W
179DQA1*05:01Venezuela Sierra de Perija Yucpa0.1250739_0_N_72_0_W
180DQA1*05:01China Yichun0.12207625_2_N_102_42_E
181DQA1*05:01India Northeast Rastogi0.122019626_48_N_80_54_E
182DQA1*05:01Russia Siberia Kushun Buryat0.12002554_54_N_99_2_E
183DQA1*05:01Uganda Baganda0.1170470_18_N_32_34_E
184DQA1*05:01Brazil Paraná Caucasian18.70.114764123_25_S_51_55_W
185DQA1*05:01Azores Terceira Island0.113013038_44_N_27_19_W
186DQA1*05:01India Northeast Mathur0.113015526_48_N_80_54_E
187DQA1*05:01India Northeast Lachung0.11205827_19_N_88_50_E
188DQA1*05:01Spain Valencia20.857739_29_N_0_22_W
189DQA1*05:01Portugal Azores Terceira Island21.10.109613038_43_N_27_13_W
190DQA1*05:01Thailand North Dai Lue0.10909613_45_N_100_29_E
191DQA1*05:01Thailand Kamphaeng Phet0.10309716_28_N_99_31_E
192DQA1*05:01Italy Bergamo19.80.100010145_42_N_9_40_E
193DQA1*05:01Czech Republic pop 316.70.092018050_7_N_14_24_E
194DQA1*05:01Japan pop 80.091030835_41_N_139_46_E
195DQA1*05:01Japan pop 20.087091635_41_N_139_46_E
196DQA1*05:01Sri Lanka Colombo16.50.08507146_56_N_79_50_E
197DQA1*05:01Japan pop 1116.16235_41_N_139_46_E
198DQA1*05:01Nauru0.0820670_31_S_166_56_E
199DQA1*05:01Japan0.08005035_41_N_139_46_E
200DQA1*05:01Kosovo15.30.076612442_34_N_21_0_E
201DQA1*05:01Italy North pop 314.40.07309743_0_N_12_0_E
202DQA1*05:01Brazil Puyanawa12.70.070015010_52_S_53_5_W
203DQA1*05:01Japan Fukuoka0.07008633_35_N_130_24_E
204DQA1*05:01Papua New Guinea Highland pop20.0700285_25_S_143_30_E
205DQA1*05:01Greece pop 50.068050040_38_N_22_57_E
206DQA1*05:01Colombia Amazon Region Coreguaje0.0670301_36_N_75_36_W
207DQA1*05:01Hong Kong Chinese HKBMDR. DQ and DP12.70.06631,06422_17_N_114_9_E
208DQA1*05:01China Zhejiang Han pop 20.061883327_2_N_118_1_E
209DQA1*05:01Papua New Guinea Eastern Highlands Goroka Asaro0.0610576_5_S_145_23_E
210DQA1*05:01Ecuador Cayapa pop 20.0588340_10_N_78_29_W
211DQA1*05:01Colombia Sierra Nevada de Santa Marta Ijka pop 20.05003010_52_N_73_43_W
212DQA1*05:01South Korea pop 10.031032437_0_N_126_0_E
213DQA1*05:01India Northeast Mech0.02406327_8_N_80_31_E
214DQA1*05:01Kiribati0.0240621_28_S_173_2_E
215DQA1*05:01South Korea pop 44.721137_35_N_127_0_E
216DQA1*05:01Indonesia Java Yogyakarta Region0.0200627_47_S_110_22_E
217DQA1*05:01Mexico Tixcacaltuyub Maya0.01496720_29_N_88_54_W
218DQA1*05:01Ecuador African pop20.0111450_10_N_78_29_W
219DQA1*05:01Mexico Chichen Itza Maya (prehispanic)0.01064720_40_N_88_34_W
220DQA1*05:01Mexico Chiapas Lacandon Mayans0.004621816_54_N_92_5_W
221DQA1*05:01Japan pop 170.00073,07837_36_N_138_2_E
222DQA1*05:01:01Kenya0.28201441_28_S_36_8_E
223DQA1*05:01:01Slovenia47.010046_15_N_15_1_E
224DQA1*05:01:01USA San Francisco Caucasian0.261022037_46_N_122_25_W
225DQA1*05:01:01Mongolia Tarialan Khoton0.18908549_46_N_91_54_E
226DQA1*05:01:01Mongolia Ulaanbaatar Khalkha0.15904147_55_N_106_55_E
227DQA1*05:01:01England pop 20.154011453_23_N_1_28_W
228DQA1*05:01:01Netherlands pop 220.015552_22_N_7_0_E
229DQA1*05:01:01Iran0.08605835_42_N_51_25_E
230DQA1*05:01:01Russian Federation Vologda Region16.80.084011959_13_N_39_54_E
231DQA1*05:01:01Russia Belgorod region14.40.071915350_46_N_37_27_E
232DQA1*05:01:01Hong Kong Chinese HKBMDR HLA 11 loci13.00.06705,26622_25_N_114_17_E
233DQA1*05:01:01South Korea pop 50.030046737_33_N_126_59_E
234DQA1*05:01:01South Korea pop 23.40.017020737_0_N_126_0_E
235DQA1*05:01:01USA Arizona Gila River Pima0.00173,00033_4_N_111_43_W
236DQA1*05:01:02USA Arizona Gila River Pima0.00133,00033_4_N_111_43_W
237DQA1*05:01:02England pop 20.000011453_23_N_1_28_W
238DQA1*05:01:02Netherlands pop 20.015552_22_N_7_0_E
239DQA1*05:01:02Slovenia0.010046_15_N_15_1_E
240DQA1*05:01:02South Korea pop 50.000046737_33_N_126_59_E



   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

support@allelefrequencies.net


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