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HLA » Allele Frequency Search
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| Line | Allele | Population | % of individuals that have the allele |
Allele Frequency |
Sample Size |
Location |
|---|---|---|---|---|---|---|
| 1 | B*52 | India Bikaner Non-Raikas | 7.8 | 127 | 28_1_N_73_18_E | |
| 2 | B*52 | India Bikaner Raikas | 7.6 | 143 | 28_1_N_73_18_E | |
| 3 | B*52 | India Kerala Adiya | 0.2140 | 21 | 11_36_N_76_5_E | |
| 4 | B*52 | India Kerala Hindu Ezhava | 0.0000 | 24 | 8_48_N_76_36_E | |
| 5 | B*52 | India Kerala Hindu Nair | 0.0730 | 41 | 8_48_N_76_36_E | |
| 6 | B*52 | India Kerala Hindu Namboothiri | 0.0380 | 40 | 11_14_N_75_44_E | |
| 7 | B*52 | India Kerala Hindu Pulaya | 0.0000 | 16 | 11_48_N_75_19_E | |
| 8 | B*52 | India Kerala Kanikkar | 0.0450 | 22 | 8_30_N_76_55_E | |
| 9 | B*52 | India Kerala Kattunaikka | 0.2650 | 17 | 11_36_N_76_5_E | |
| 10 | B*52 | India Kerala Kurichiya | 0.0000 | 10 | 11_36_N_76_5_E | |
| 11 | B*52 | India Kerala Kuruma | 0.0330 | 15 | 11_36_N_76_5_E | |
| 12 | B*52 | India Kerala Malabar Muslim | 0.0290 | 34 | 11_2_N_76_3_E | |
| 13 | B*52 | India Kerala Malapandaram | 0.0500 | 10 | 9_13_N_76_43_E | |
| 14 | B*52 | India Kerala Paniya | 0.3500 | 10 | 11_36_N_76_5_E | |
| 15 | B*52 | India Kerala Syrian Christian | 0.0160 | 31 | 9_35_N_76_31_E | |
| 16 | B*52 | India North Gujarat | 13.9 | 0.0710 | 338 | 23_13_N_72_41_E |
| 17 | B*52 | India North pop 3 | 0.0980 | 587 | 28_38_N_77_9_E | |
| 18 | B*52 | India sub-Himalayan West Bengal Kami | 4.4 | 0.0222 | 158 | 27_2_N_88_15_E |
| 19 | B*52:01 | India Central UCBB | 17.8 | 0.0888 | 4,204 | 27_1_N_81_19_E |
| 20 | B*52:01 | India Delhi pop 2 | 8.8 | 0.0490 | 90 | 28_36_N_77_13_E |
| 21 | B*52:01 | India East UCBB | 18.6 | 0.0928 | 2,403 | 22_25_N_88_18_E |
| 22 | B*52:01 | India North UCBB | 16.5 | 0.0822 | 5,849 | 28_36_N_77_11_E |
| 23 | B*52:01 | India Northeast UCBB | 16.9 | 0.0963 | 296 | 26_16_N_91_48_E |
| 24 | B*52:01 | India South UCBB | 18.5 | 0.0925 | 11,446 | 13_6_N_80_8_E |
| 25 | B*52:01 | India Tamil Nadu | 0.0713 | 2,492 | 11_32_N_78_52_E | |
| 26 | B*52:01 | India West UCBB | 16.2 | 0.0809 | 5,829 | 19_11_N_73_3_E |
| 27 | B*52:01 | Malaysia Peninsular Indian | 11.8 | 0.0627 | 271 | 3_9_N_101_57_E |
| 28 | B*52:01 | Singapore SGVP. Indian INS | 0.0750 | 86 | 1_21_N_103_50_E | |
| 29 | B*52:01 | USA NMDP American Indian South or Central America | 0.0140 | 5,926 | 38_45_N_76_6_W | |
| 30 | B*52:01 | USA NMDP Caribean Indian | 0.0320 | 14,339 | 38_45_N_76_6_W | |
| 31 | B*52:01 | USA NMDP North American Amerindian | 0.0066 | 35,791 | 38_45_N_76_6_W | |
| 32 | B*52:01 | USA NMDP South Asian Indian | 0.0745 | 185,391 | 38_45_N_76_6_W | |
| 33 | B*52:01:01 | India Andhra Pradesh Golla | 0.1200 | 111 | 17_5_N_78_5_E | |
| 34 | B*52:01:01 | India Andhra Pradesh Telugu Speaking | 16.1 | 0.0860 | 186 | 13_4_N_80_14_E |
| 35 | B*52:01:01 | India Karnataka Kannada Speaking | 9.2 | 0.0490 | 174 | 12_57_N_77_36_E |
| 36 | B*52:01:01 | India Kerala Malayalam speaking | 9.0 | 0.0500 | 356 | 13_1_N_80_15_E |
| 37 | B*52:01:01 | India Khandesh Region Pawra | 0.0000 | 50 | 20_54_N_74_46_E | |
| 38 | B*52:01:01 | India Mumbai Maratha | 0.0560 | 91 | 18_58_N_72_49_E | |
| 39 | B*52:01:01 | India New Delhi | 0.0610 | 71 | 28_37_N_77_13_E | |
| 40 | B*52:01:01 | India North pop 2 | 0.0670 | 72 | 25_0_N_74_0_E | |
| 41 | B*52:01:01 | India West Bhil | 0.0000 | 50 | 20_54_N_74_46_E | |
| 42 | B*52:01:01 | India West Coast Parsi | 0.0500 | 50 | 18_0_N_74_0_E | |
| 43 | B*52:01:01 | South African Indian population | 12.0 | 0.0600 | 50 | 29_22_S_24_31_E |
| 44 | B*52:01:02 | Costa Rica Amerindians (G) | 2.4 | 0.0120 | 125 | 9_34_N_83_25_W |
| 45 | B*52:01:02 | India Kerala Malayalam speaking | 0.3 | 0.0010 | 356 | 13_1_N_80_15_E |
| 46 | B*52:04 | India Central UCBB | 0.9 | 0.0044 | 4,204 | 27_1_N_81_19_E |
| 47 | B*52:04 | India East UCBB | 1.0 | 0.0052 | 2,403 | 22_25_N_88_18_E |
| 48 | B*52:04 | India North UCBB | 0.7 | 0.0037 | 5,849 | 28_36_N_77_11_E |
| 49 | B*52:04 | India Northeast UCBB | 0.7 | 0.0034 | 296 | 26_16_N_91_48_E |
| 50 | B*52:04 | India South UCBB | 0.2 | 0.0011 | 11,446 | 13_6_N_80_8_E |
| 51 | B*52:04 | India Tamil Nadu | 0.0002 | 2,492 | 11_32_N_78_52_E | |
| 52 | B*52:04 | India West UCBB | 0.8 | 0.0039 | 5,829 | 19_11_N_73_3_E |
| 53 | B*52:04 | USA NMDP South Asian Indian | 0.0003 | 185,391 | 38_45_N_76_6_W | |
| 54 | B*52:06 | USA NMDP South Asian Indian | 0.0000 | 185,391 | 38_45_N_76_6_W | |
| 55 | B*52:07 | India South UCBB | 0.0 | 0.0001 | 11,446 | 13_6_N_80_8_E |
| 56 | B*52:10 | India Central UCBB | 0.0 | 0.0001 | 4,204 | 27_1_N_81_19_E |
| 57 | B*52:10 | USA NMDP South Asian Indian | 0.0000 | 185,391 | 38_45_N_76_6_W | |
| 58 | B*52:11 | Malaysia Peninsular Indian | 0.7 | 0.0037 | 271 | 3_9_N_101_57_E |
| 59 | B*52:11 | USA NMDP South Asian Indian | 0.0000 | 185,391 | 38_45_N_76_6_W | |
| 60 | B*52:16 | USA NMDP South Asian Indian | 0.0000 | 185,391 | 38_45_N_76_6_W | |
| 61 | B*52:19 | India South UCBB | 0.0 | 0.0000 | 11,446 | 13_6_N_80_8_E |
| 62 | B*52:37 | India South UCBB | 0.0 | 0.0001 | 11,446 | 13_6_N_80_8_E |
| 63 | B*52:53 | India East UCBB | 0.1 | 0.0004 | 2,403 | 22_25_N_88_18_E |
| 64 | B*52:80 | India Central UCBB | 0.0 | 0.0001 | 4,204 | 27_1_N_81_19_E |
| 65 | B*52:88 | India East UCBB | 0.0 | 0.0002 | 2,403 | 22_25_N_88_18_E |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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