HLA > Allele Frequency Search > Classical

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Displaying 1 to 52 (from 52) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele
Allele
Frequency
(in_decimals)
Sample
Size
IMGT/HLA¹
Database
Distribution² Haplotype³
Association
Notesª
 1   B*07:02:01  Costa Rica Guanacaste Mestizo (G) 9.2 (*) 0.0550 (*)110See
 2   B*07:05:01  Costa Rica Guanacaste Mestizo (G) 1.8 (*) 0.0090 (*)110See
 3   B*08:01:01  Costa Rica Guanacaste Mestizo (G) 7.2 (*) 0.0360 (*)110See
 4   B*13:02:01  Costa Rica Guanacaste Mestizo (G) 1.8 (*) 0.0090 (*)110See
 5   B*14:01:01  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 6   B*14:02:01  Costa Rica Guanacaste Mestizo (G) 5.4 (*) 0.0270 (*)110See
 7   B*15:01:01  Costa Rica Guanacaste Mestizo (G) 6.4 (*) 0.0320 (*)110See
 8   B*15:03:01  Costa Rica Guanacaste Mestizo (G) 10.1 (*) 0.0550 (*)110See
 9   B*15:10:01  Costa Rica Guanacaste Mestizo (G) 1.8 (*) 0.0090 (*)110See
 10   B*15:17:01  Costa Rica Guanacaste Mestizo (G) 2.8 (*) 0.0140 (*)110See
 11   B*18:01:01  Costa Rica Guanacaste Mestizo (G) 9.2 (*) 0.0460 (*)110See
 12   B*18:05  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 13   B*27:03  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 14   B*35:01:01  Costa Rica Guanacaste Mestizo (G) 10.0 (*) 0.0500 (*)110See
 15   B*35:02:01  Costa Rica Guanacaste Mestizo (G) 1.8 (*) 0.0090 (*)110See
 16   B*35:03:01  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 17   B*35:08:01  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 18   B*35:12:01  Costa Rica Guanacaste Mestizo (G) 7.2 (*) 0.0360 (*)110See
 19   B*35:17:01  Costa Rica Guanacaste Mestizo (G) 1.8 (*) 0.0090 (*)110See
 20   B*35:20:01  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 21   B*35:43:01  Costa Rica Guanacaste Mestizo (G) 9.1 (*) 0.0500 (*)110See
 22   B*37:01:01  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 23   B*38:01:01  Costa Rica Guanacaste Mestizo (G) 2.8 (*) 0.0140 (*)110See
 24   B*39:01:01  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 25   B*39:02:02  Costa Rica Guanacaste Mestizo (G) 3.6 (*) 0.0180 (*)110See
 26   B*39:05:01  Costa Rica Guanacaste Mestizo (G) 3.6 (*) 0.0180 (*)110See
 27   B*39:11  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 28   B*40:01:01  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 29   B*40:02:01  Costa Rica Guanacaste Mestizo (G) 13.6 (*) 0.0680 (*)110See
 30   B*40:08  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 31   B*40:27:01  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 32   B*40:119  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 33   B*41:01  Costa Rica Guanacaste Mestizo (G) 1.8 (*) 0.0090 (*)110See
 34   B*41:02:01  Costa Rica Guanacaste Mestizo (G) 1.8 (*) 0.0090 (*)110See
 35   B*42:01:01  Costa Rica Guanacaste Mestizo (G) 2.8 (*) 0.0140 (*)110See
 36   B*42:02  Costa Rica Guanacaste Mestizo (G) 1.8 (*) 0.0090 (*)110See
 37   B*44:02:01  Costa Rica Guanacaste Mestizo (G) 6.4 (*) 0.0320 (*)110See
 38   B*44:03:01  Costa Rica Guanacaste Mestizo (G) 9.1 (*) 0.0500 (*)110See
 39   B*45:01  Costa Rica Guanacaste Mestizo (G) 4.6 (*) 0.0230 (*)110See
 40   B*49:01:01  Costa Rica Guanacaste Mestizo (G) 2.8 (*) 0.0140 (*)110See
 41   B*50:01:01  Costa Rica Guanacaste Mestizo (G) 4.6 (*) 0.0230 (*)110See
 42   B*51:01:01  Costa Rica Guanacaste Mestizo (G) 9.2 (*) 0.0460 (*)110See
 43   B*51:08  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 44   B*52:01:01  Costa Rica Guanacaste Mestizo (G) 1.8 (*) 0.0090 (*)110See
 45   B*52:01:02  Costa Rica Guanacaste Mestizo (G) 3.6 (*) 0.0180 (*)110See
 46   B*53:01:01  Costa Rica Guanacaste Mestizo (G) 9.2 (*) 0.0460 (*)110See
 47   B*55:01:01  Costa Rica Guanacaste Mestizo (G) 2.8 (*) 0.0140 (*)110See
 48   B*57:01:01  Costa Rica Guanacaste Mestizo (G) 1.0 (*) 0.0050 (*)110See
 49   B*57:02:01  Costa Rica Guanacaste Mestizo (G) 1.8 (*) 0.0090 (*)110See
 50   B*57:03:01  Costa Rica Guanacaste Mestizo (G) 1.8 (*) 0.0090 (*)110See
 51   B*58:01:01  Costa Rica Guanacaste Mestizo (G) 4.6 (*) 0.0230 (*)110See
 52   B*58:02  Costa Rica Guanacaste Mestizo (G) 2.8 (*) 0.0140 (*)110See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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