HLA > Allele Frequency Search > Classical

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Displaying 1 to 40 (from 40) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele
Allele
Frequency
(in_decimals)
Sample
Size
IMGT/HLA¹
Database
Distribution² Haplotype³
Association
Notesª
 1   DRB1*08  India Andhra Pradesh Brahmin 0.3 0.005098See
 2   DRB1*08  India Andhra Pradesh Sunni 0.3 0.0050100See
 3   DRB1*08  India New Delhi pop 2  0102See
 4   DRB1*08  India North Gujarat 3.9 0.0195338See
 5   DRB1*08  India North pop 3  0.0162587See
 6   DRB1*08  India Northeast Kayastha  0.0030190See
 7   DRB1*08  India Northeast Lachung  0.077058See
 8   DRB1*08  India Northeast Mathur  0155See
 9   DRB1*08  India Northeast Mech  0.111063See
 10   DRB1*08  India Northeast Rajbanshi  0.092098See
 11   DRB1*08  India Northeast Rastogi  0.0100196See
 12   DRB1*08  India Northeast Shia  0.0050190See
 13   DRB1*08  India Northeast Sunni  0.0080188See
 14   DRB1*08  India Northeast Vaish  0.0030198See
 15   DRB1*08  India sub-Himalayan West Bengal Kami 4.4 0.0222158See
 16   DRB1*08  India Tamil Nadu Chennai 5.1 0.0258137See
 17   DRB1*08  India Tamil Nadu Dravidian  0.1340156See
 18   DRB1*08  India Uttar Pradesh  0.0030202See
 19   DRB1*08:01  India Andhra Pradesh Golla  0.0050111See
 20   DRB1*08:01  India Delhi  0.0050112See
 21   DRB1*08:01  India North 2.3 0.011585See
 22   DRB1*08:01  India North pop 2  0.009072See
 23   DRB1*08:01  India Tamil Nadu  0.00042,492See
 24   DRB1*08:01:01  India Kerala Malayalam speaking 0.3 0.0010356See
 25   DRB1*08:01:01  India Mumbai Maratha  0.016091See
 26   DRB1*08:02  India Lucknow 0.8 0.0040123See
 27   DRB1*08:02  India Tamil Nadu  0.00632,492See
 28   DRB1*08:02:01  India Andhra Pradesh Telugu Speaking 2.7 0.0134186See
 29   DRB1*08:02:01  India Kerala Malayalam speaking 0.8 0.0040356See
 30   DRB1*08:03  India North 0.0 085See
 31   DRB1*08:03  India Tamil Nadu  0.01222,492See
 32   DRB1*08:03:02  India Andhra Pradesh Golla  0.0180111See
 33   DRB1*08:03:02  India Andhra Pradesh Telugu Speaking 1.6 0.0081186See
 34   DRB1*08:03:02  India Karnataka Kannada Speaking 1.7 0.0090174See
 35   DRB1*08:03:02  India Kerala Malayalam speaking 5.3 0.0270356See
 36   DRB1*08:04  India North 0.0 085See
 37   DRB1*08:04  India Tamil Nadu  0.00082,492See
 38   DRB1*08:04:01  India Andhra Pradesh Telugu Speaking 0.5 0.0027186See
 39   DRB1*08:04:01  India Kerala Malayalam speaking 0.6 0.0030356See
 40   DRB1*08:18  India Andhra Pradesh Telugu Speaking 0.5 0.0027186See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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