HLA > Allele Frequency Search > Classical

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Displaying 1 to 100 (from 120) records   Pages: 1 2 of 2  

Line Allele Population % of individuals
that have the allele		 Allele
Frequency
(in_decimals)		 Sample
Size		 IMGT/HLA¹
Database		 Distribution² Haplotype³
Association		 Notesª
 1   DQB1*05  India New Delhi pop 2  0.1810102See
 2   DQB1*05  India North Gujarat 27.3 0.1364338See
 3   DQB1*05:01  India Bombay  0.076059See
 4   DQB1*05:01  India Central UCBB 15.8 0.07874,204See
 5   DQB1*05:01  India Delhi 14.3 0.0742112See
 6   DQB1*05:01  India East UCBB 20.8 0.10382,403See
 7   DQB1*05:01  India Lucknow 23.3 0.1250123See
 8   DQB1*05:01  India North pop 2  0.082072See
 9   DQB1*05:01  India North UCBB 14.5 0.07225,849See
 10   DQB1*05:01  India Northeast Kayastha  0.0970190See
 11   DQB1*05:01  India Northeast Lachung  0.172058See
 12   DQB1*05:01  India Northeast Mathur  0.1450155See
 13   DQB1*05:01  India Northeast Mech  0.167063See
 14   DQB1*05:01  India Northeast Rajbanshi  0.291098See
 15   DQB1*05:01  India Northeast Rastogi  0.1220196See
 16   DQB1*05:01  India Northeast Shia  0.1520190See
 17   DQB1*05:01  India Northeast Sunni  0.1730188See
 18   DQB1*05:01  India Northeast UCBB 21.3 0.1149296See
 19   DQB1*05:01  India Northeast Vaish  0.1790198See
 20   DQB1*05:01  India South UCBB 19.1 0.095211,446See
 21   DQB1*05:01  India Tamil Nadu  0.10842,492See
 22   DQB1*05:01  India Uttar Pradesh  0.1190202See
 23   DQB1*05:01  India West UCBB 19.6 0.09795,829See
 24   DQB1*05:01:01  India Andhra Pradesh Telugu Speaking 17.2 0.0860186See
 25   DQB1*05:01:01  India Karnataka Kannada Speaking 17.2 0.0900174See
 26   DQB1*05:01:01  India Kerala Malayalam speaking 25.8 0.1380356See
 27   DQB1*05:01:01  India Mumbai Maratha  0.116091See
 28   DQB1*05:01:03  India Karnataka Kannada Speaking 0.6 0.0030174See
 29   DQB1*05:02  India Bombay  0.017059See
 30   DQB1*05:02  India Central UCBB 7.6 0.03784,204See
 31   DQB1*05:02  India Delhi 8.0 0.0408112See
 32   DQB1*05:02  India East UCBB 8.1 0.04062,403See
 33   DQB1*05:02  India Lucknow 4.2 0.0210123See
 34   DQB1*05:02  India North pop 2  0.067072See
 35   DQB1*05:02  India North UCBB 7.4 0.03685,849See
 36   DQB1*05:02  India Northeast Kayastha  0.0030190See
 37   DQB1*05:02  India Northeast Lachung  0.069058See
 38   DQB1*05:02  India Northeast Mathur  0.0100155See
 39   DQB1*05:02  India Northeast Mech  0.071063See
 40   DQB1*05:02  India Northeast Rajbanshi  0.026098See
 41   DQB1*05:02  India Northeast Rastogi  0.0150196See
 42   DQB1*05:02  India Northeast Shia  0.0080190See
 43   DQB1*05:02  India Northeast Sunni  0.0130188See
 44   DQB1*05:02  India Northeast UCBB 22.6 0.1250296See
 45   DQB1*05:02  India Northeast Vaish  0.0150198See
 46   DQB1*05:02  India South UCBB 4.5 0.022611,446See
 47   DQB1*05:02  India Tamil Nadu  0.01352,492See
 48   DQB1*05:02  India Uttar Pradesh  0.0150202See
 49   DQB1*05:02  India West UCBB 6.1 0.03035,829See
 50   DQB1*05:02:01  India Andhra Pradesh Telugu Speaking 2.7 0.0134186See
 51   DQB1*05:02:01  India Karnataka Kannada Speaking 2.3 0.0110174See
 52   DQB1*05:02:01  India Kerala Malayalam speaking 2.5 0.0130356See
 53   DQB1*05:02:01  India Mumbai Maratha  0.004091See
 54   DQB1*05:02:04  India Karnataka Kannada Speaking 0.6 0.0030174See
 55   DQB1*05:03  India Central UCBB 22.7 0.11334,204See
 56   DQB1*05:03  India Delhi 25.0 0.1339112See
 57   DQB1*05:03  India East UCBB 20.8 0.10382,403See
 58   DQB1*05:03  India Lucknow 14.2 0.0710123See
 59   DQB1*05:03  India North UCBB 19.9 0.09965,849See
 60   DQB1*05:03  India Northeast Kayastha  0.0630190See
 61   DQB1*05:03  India Northeast Lachung  0.026058See
 62   DQB1*05:03  India Northeast Mathur  0.0650155See
 63   DQB1*05:03  India Northeast Mech  0.008063See
 64   DQB1*05:03  India Northeast Rajbanshi  0.015098See
 65   DQB1*05:03  India Northeast Rastogi  0.0830196See
 66   DQB1*05:03  India Northeast Shia  0.0240190See
 67   DQB1*05:03  India Northeast Sunni  0.0820188See
 68   DQB1*05:03  India Northeast UCBB 18.6 0.0929296See
 69   DQB1*05:03  India Northeast Vaish  0.0760198See
 70   DQB1*05:03  India South UCBB 20.2 0.100911,446See
 71   DQB1*05:03  India Tamil Nadu  0.09672,492See
 72   DQB1*05:03  India Uttar Pradesh  0.0640202See
 73   DQB1*05:03  India West UCBB 21.0 0.10515,829See
 74   DQB1*05:03:01  India Andhra Pradesh Telugu Speaking 16.1 0.0860186See
 75   DQB1*05:03:01  India Bombay  0.119059See
 76   DQB1*05:03:01  India Karnataka Kannada Speaking 20.7 0.1060174See
 77   DQB1*05:03:01  India Kerala Malayalam speaking 18.3 0.0970356See
 78   DQB1*05:03:01  India Mumbai Maratha  0.089091See
 79   DQB1*05:03:01  India North pop 2  0.112072See
 80   DQB1*05:03:02  India Bombay  059See
 81   DQB1*05:04  India Bombay  059See
 82   DQB1*05:04  India Karnataka Kannada Speaking 0.6 0.0030174See
 83   DQB1*05:04  India Lucknow 0.8 0.0040123See
 84   DQB1*05:04  India North pop 2  0.008072See
 85   DQB1*05:04  India North UCBB 0.0300 0.00025,849See
 86   DQB1*05:04  India Northeast Kayastha  0.0050190See
 87   DQB1*05:04  India Northeast Lachung  058See
 88   DQB1*05:04  India Northeast Mathur  0.0030155See
 89   DQB1*05:04  India Northeast Mech  063See
 90   DQB1*05:04  India Northeast Rajbanshi  098See
 91   DQB1*05:04  India Northeast Rastogi  0.0050196See
 92   DQB1*05:04  India Northeast Shia  0.0450190See
 93   DQB1*05:04  India Northeast Sunni  0.0210188See
 94   DQB1*05:04  India Northeast Vaish  0.0150198See
 95   DQB1*05:04  India South UCBB 0.0300 0.000211,446See
 96   DQB1*05:04  India Tamil Nadu  0.00102,492See
 97   DQB1*05:04  India Uttar Pradesh  0.0050202See
 98   DQB1*05:10  India Andhra Pradesh Telugu Speaking 0.5 0.0027186See
 99   DQB1*05:10  India Central UCBB 0.1 0.00074,204See
 100   DQB1*05:10  India East UCBB 0.2 0.00102,403See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.


Displaying 1 to 100 (from 120) records   Pages: 1 2 of 2  





   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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