HLA > Allele Frequency Search > Classical

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Displaying 1 to 49 (from 49) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele
Allele
Frequency
(in_decimals)
Sample
Size
IMGT/HLA¹
Database
Distribution² Haplotype³
Association
Notesª
 1   B*52  India Kerala Adiya  0.214021See
 2   B*52  India Kerala Hindu Ezhava  024See
 3   B*52  India Kerala Hindu Nair  0.073041See
 4   B*52  India Kerala Hindu Namboothiri  0.038040See
 5   B*52  India Kerala Hindu Pulaya  016See
 6   B*52  India Kerala Kanikkar  0.045022See
 7   B*52  India Kerala Kattunaikka  0.265017See
 8   B*52  India Kerala Kurichiya  010See
 9   B*52  India Kerala Kuruma  0.033015See
 10   B*52  India Kerala Malabar Muslim  0.029034See
 11   B*52  India Kerala Malapandaram  0.050010See
 12   B*52  India Kerala Paniya  0.350010See
 13   B*52  India Kerala Syrian Christian  0.016031See
 14   B*52  India North Gujarat 13.9 0.0710338See
 15   B*52  India North pop 3  0.0980587See
 16   B*52  India sub-Himalayan West Bengal Kami 4.4 0.0222158See
 17   B*52:01  India Central UCBB 17.8 0.08884,204See
 18   B*52:01  India Delhi pop 2 8.8 0.049090See
 19   B*52:01  India East UCBB 18.6 0.09282,403See
 20   B*52:01  India North UCBB 16.5 0.08225,849See
 21   B*52:01  India Northeast UCBB 16.9 0.0963296See
 22   B*52:01  India South UCBB 18.5 0.092511,446See
 23   B*52:01  India Tamil Nadu  0.07132,492See
 24   B*52:01  India West UCBB 16.2 0.08095,829See
 25   B*52:01:01  India Andhra Pradesh Golla  0.1200111See
 26   B*52:01:01  India Andhra Pradesh Telugu Speaking 16.1 0.0860186See
 27   B*52:01:01  India Karnataka Kannada Speaking 9.2 0.0490174See
 28   B*52:01:01  India Kerala Malayalam speaking 9.0 0.0500356See
 29   B*52:01:01  India Khandesh Region Pawra  050See
 30   B*52:01:01  India Mumbai Maratha  0.056091See
 31   B*52:01:01  India New Delhi  0.061071See
 32   B*52:01:01  India North pop 2  0.067072See
 33   B*52:01:01  India West Bhil  050See
 34   B*52:01:01  India West Coast Parsi  0.050050See
 35   B*52:01:02  India Kerala Malayalam speaking 0.3 0.0010356See
 36   B*52:04  India Central UCBB 0.9 0.00444,204See
 37   B*52:04  India East UCBB 1.0 0.00522,403See
 38   B*52:04  India North UCBB 0.7 0.00375,849See
 39   B*52:04  India Northeast UCBB 0.7 0.0034296See
 40   B*52:04  India South UCBB 0.2 0.001111,446See
 41   B*52:04  India Tamil Nadu  0.00022,492See
 42   B*52:04  India West UCBB 0.8 0.00395,829See
 43   B*52:07  India South UCBB 0.0200 0.000090011,446See
 44   B*52:10  India Central UCBB 0.0200 0.00014,204See
 45   B*52:19  India South UCBB 0.0100 0.000040011,446See
 46   B*52:37  India South UCBB 0.0200 0.000090011,446See
 47   B*52:53  India East UCBB 0.0800 0.00042,403See
 48   B*52:80  India Central UCBB 0.0200 0.00014,204See
 49   B*52:88  India East UCBB 0.0400 0.00022,403See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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