HLA > Allele Frequency Search > Classical

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Displaying 1 to 28 (from 28) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele
Allele
Frequency
(in_decimals)
Sample
Size
IMGT/HLA¹
Database
Distribution² Haplotype³
Association
Notesª
 1   A*29  India Jalpaiguri Toto 7.5 0.038240See
 2   A*29  India Kerala Hindu Ezhava  024See
 3   A*29  India Kerala Hindu Nair  0.024041See
 4   A*29  India Kerala Hindu Namboothiri  040See
 5   A*29  India Kerala Hindu Pulaya  016See
 6   A*29  India Kerala Malabar Muslim  034See
 7   A*29  India Kerala Syrian Christian  031See
 8   A*29  India North Gujarat 5.6 0.0281338See
 9   A*29  India North pop 3  0.0080587See
 10   A*29  India sub-Himalayan West Bengal Kami 3.2 0.0158158See
 11   A*29:01  India Delhi pop 2 2.2 0.011090See
 12   A*29:01  India Khandesh Region Pawra  050See
 13   A*29:01  India Mumbai Maratha  091See
 14   A*29:01  India New Delhi  0.015071See
 15   A*29:01  India North pop 2  0.019072See
 16   A*29:01  India Tamil Nadu  0.00782,492See
 17   A*29:01  India West Bhil  050See
 18   A*29:01  India West Coast Parsi  0.020050See
 19   A*29:01:01  India Andhra Pradesh Telugu Speaking 1.1 0.0054186See
 20   A*29:01:01  India Karnataka Kannada Speaking 5.2 0.0260174See
 21   A*29:01:01  India Kerala Malayalam speaking 3.9 0.0200356See
 22   A*29:02  India Delhi pop 2 5.6 0.027090See
 23   A*29:02  India Khandesh Region Pawra  050See
 24   A*29:02  India Mumbai Maratha  091See
 25   A*29:02  India Tamil Nadu  0.00042,492See
 26   A*29:02  India West Bhil  050See
 27   A*29:02  India West Coast Parsi  0.020050See
 28   A*29:02:01  India Kerala Malayalam speaking 0.3 0.0010356See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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