HLA > Allele Frequency Search > Classical

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Displaying 1 to 100 (from 139) records   Pages: 1 2 of 2  

Line Allele Population % of individuals
that have the allele		 Allele
Frequency
(in_decimals)		 Sample
Size		 IMGT/HLA¹
Database		 Distribution² Haplotype³
Association		 Notesª
 1   DQB1*03  India New Delhi pop 2  0.3630102See
 2   DQB1*03  India North Gujarat 54.6 0.3788338See
 3   DQB1*03:01  India Bombay  0.102059See
 4   DQB1*03:01  India Central UCBB 25.5 0.12734,204See
 5   DQB1*03:01  India Delhi 25.0 0.1339112See
 6   DQB1*03:01  India East UCBB 24.4 0.13192,403See
 7   DQB1*03:01  India Lucknow 25.8 0.1290123See
 8   DQB1*03:01  India North pop 2  0.134072See
 9   DQB1*03:01  India North UCBB 28.2 0.15275,849See
 10   DQB1*03:01  India Northeast Kayastha  0.1370190See
 11   DQB1*03:01  India Northeast Lachung  0.233058See
 12   DQB1*03:01  India Northeast Mathur  0.0940155See
 13   DQB1*03:01  India Northeast Mech  0.262063See
 14   DQB1*03:01  India Northeast Rajbanshi  0.234098See
 15   DQB1*03:01  India Northeast Rastogi  0.0970196See
 16   DQB1*03:01  India Northeast Shia  0.1420190See
 17   DQB1*03:01  India Northeast Sunni  0.1330188See
 18   DQB1*03:01  India Northeast UCBB 40.5 0.2382296See
 19   DQB1*03:01  India Northeast Vaish  0.1520198See
 20   DQB1*03:01  India South UCBB 22.1 0.118611,446See
 21   DQB1*03:01  India Tamil Nadu  0.10122,492See
 22   DQB1*03:01  India Uttar Pradesh  0.1460202See
 23   DQB1*03:01  India West UCBB 23.1 0.12425,829See
 24   DQB1*03:01:01  India Andhra Pradesh Telugu Speaking 21.5 0.1129186See
 25   DQB1*03:01:01  India Karnataka Kannada Speaking 10.9 0.0550174See
 26   DQB1*03:01:01  India Kerala Malayalam speaking 18.8 0.1000356See
 27   DQB1*03:01:01  India Mumbai Maratha  0.136091See
 28   DQB1*03:01:03  India Mumbai Maratha  091See
 29   DQB1*03:01:14  India Kerala Malayalam speaking 0.3 0.0010356See
 30   DQB1*03:02  India Bombay  0.076059See
 31   DQB1*03:02  India Central UCBB 13.7 0.06834,204See
 32   DQB1*03:02  India Delhi 8.9 0.0455112See
 33   DQB1*03:02  India East UCBB 12.9 0.06472,403See
 34   DQB1*03:02  India Lucknow 11.7 0.0710123See
 35   DQB1*03:02  India North pop 2  0.030072See
 36   DQB1*03:02  India North UCBB 13.6 0.06795,849See
 37   DQB1*03:02  India Northeast Kayastha  0.0340190See
 38   DQB1*03:02  India Northeast Lachung  058See
 39   DQB1*03:02  India Northeast Mathur  0.0550155See
 40   DQB1*03:02  India Northeast Mech  063See
 41   DQB1*03:02  India Northeast Rajbanshi  0.015098See
 42   DQB1*03:02  India Northeast Rastogi  0.0310196See
 43   DQB1*03:02  India Northeast Shia  0.0470190See
 44   DQB1*03:02  India Northeast Sunni  0.0290188See
 45   DQB1*03:02  India Northeast UCBB 12.2 0.0608296See
 46   DQB1*03:02  India Northeast Vaish  0.0280198See
 47   DQB1*03:02  India South UCBB 21.0 0.105111,446See
 48   DQB1*03:02  India Tamil Nadu  0.12032,492See
 49   DQB1*03:02  India Uttar Pradesh  0.0500202See
 50   DQB1*03:02  India West UCBB 16.1 0.08035,829See
 51   DQB1*03:02:01  India Andhra Pradesh Telugu Speaking 21.0 0.1263186See
 52   DQB1*03:02:01  India Karnataka Kannada Speaking 18.4 0.1030174See
 53   DQB1*03:02:01  India Kerala Malayalam speaking 20.5 0.1080356See
 54   DQB1*03:02:01  India Mumbai Maratha  0.027091See
 55   DQB1*03:02:02  India Kerala Malayalam speaking 0.6 0.0030356See
 56   DQB1*03:02:08  India Kerala Malayalam speaking 0.3 0.0010356See
 57   DQB1*03:03  India Central UCBB 10.0 0.04984,204See
 58   DQB1*03:03  India Delhi 6.3 0.0320112See
 59   DQB1*03:03  India East UCBB 13.8 0.06912,403See
 60   DQB1*03:03  India Lucknow 14.2 0.0710123See
 61   DQB1*03:03  India North pop 2  0.037072See
 62   DQB1*03:03  India North UCBB 8.0 0.04005,849See
 63   DQB1*03:03  India Northeast Kayastha  0.1030190See
 64   DQB1*03:03  India Northeast Lachung  0.052058See
 65   DQB1*03:03  India Northeast Mathur  0.0840155See
 66   DQB1*03:03  India Northeast Mech  0.032063See
 67   DQB1*03:03  India Northeast Rajbanshi  0.020098See
 68   DQB1*03:03  India Northeast Rastogi  0.1070196See
 69   DQB1*03:03  India Northeast Shia  0.0950190See
 70   DQB1*03:03  India Northeast Sunni  0.0770188See
 71   DQB1*03:03  India Northeast UCBB 6.8 0.0338296See
 72   DQB1*03:03  India Northeast Vaish  0.0930198See
 73   DQB1*03:03  India South UCBB 17.1 0.085411,446See
 74   DQB1*03:03  India Tamil Nadu  0.09042,492See
 75   DQB1*03:03  India Uttar Pradesh  0.0670202See
 76   DQB1*03:03  India West UCBB 11.6 0.05825,829See
 77   DQB1*03:03:02  India Andhra Pradesh Telugu Speaking 14.0 0.0726186See
 78   DQB1*03:03:02  India Bombay  0.034059See
 79   DQB1*03:03:02  India Karnataka Kannada Speaking 10.3 0.0550174See
 80   DQB1*03:03:02  India Kerala Malayalam speaking 11.8 0.0620356See
 81   DQB1*03:03:02  India Mumbai Maratha  0.039091See
 82   DQB1*03:04  India Bombay  059See
 83   DQB1*03:04  India Northeast Kayastha  0.0050190See
 84   DQB1*03:04  India Northeast Lachung  058See
 85   DQB1*03:04  India Northeast Mathur  0155See
 86   DQB1*03:04  India Northeast Mech  063See
 87   DQB1*03:04  India Northeast Rajbanshi  098See
 88   DQB1*03:04  India Northeast Rastogi  0196See
 89   DQB1*03:04  India Northeast Shia  0.0030190See
 90   DQB1*03:04  India Northeast Sunni  0.0050188See
 91   DQB1*03:04  India Northeast Vaish  0198See
 92   DQB1*03:04  India Tamil Nadu  0.00022,492See
 93   DQB1*03:04  India Uttar Pradesh  0.0020202See
 94   DQB1*03:04  India West UCBB 0.0200 0.00009005,829See
 95   DQB1*03:04:01  India Karnataka Kannada Speaking 0.6 0.0030174See
 96   DQB1*03:05  India Bombay  059See
 97   DQB1*03:05  India Central UCBB 0.4 0.00184,204See
 98   DQB1*03:05  India Delhi 0.9 0.0045112See
 99   DQB1*03:05  India East UCBB 0.3 0.00152,403See
 100   DQB1*03:05  India North UCBB 0.4 0.00215,849See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.


Displaying 1 to 100 (from 139) records   Pages: 1 2 of 2  





   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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