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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*02:01:01-B*39:02:02-C*03:04:01-DRB1*04:11:01 | Costa Rica Guanacaste Mestizo (G) | 1.36 | 110 | 10_16_N_85_37_W |
| 2 | A*02:06:01-B*35:01:01-C*07:02:01-DRB1*04:11:01-DQB1*04:02:01 | Costa Rica Central Valley Mestizo (G) | 1.36 | 221 | 9_55_N_84_5_W |
| 3 | A*31:01:02-B*35:01:01-C*04:01:01-DRB1*04:11:01-DQB1*03:02:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 4 | A*02:01:01-B*40:129-C*03:04:01-DRB1*04:11:01-DQB1*03:02:01-DPA1*01:03:01-DPB1*04:02:01 | Brazil Rio de Janeiro Parda | 0.59 | 170 | 22_54_S_43_12_W |
| 5 | A*02:04-B*58:01:01-C*03:02:02-DRB1*04:11:01-DQB1*04:02:01-DPA1*02:01:01-DPB1*14:01:01 | Brazil Rio de Janeiro Parda | 0.59 | 170 | 22_54_S_43_12_W |
| 6 | A*11:01:01-B*35:01:01-C*12:03:01-DRB1*04:11:01-DQB1*05:01:01-DPA1*01:03:01-DPB1*04:02:01 | Brazil Rio de Janeiro Parda | 0.59 | 170 | 22_54_S_43_12_W |
| 7 | A*24:02:01-B*40:02:01-C*03:04:01-DRB1*04:11:01-DQB1*03:02:01-DPA1*01:03:01-DPB1*04:01:01 | Brazil Rio de Janeiro Parda | 0.59 | 170 | 22_54_S_43_12_W |
| 8 | A*31:15-B*15:04:01-C*03:03:01-DRB1*04:11:01-DQB1*03:02:01-DPA1*01:03:01-DPB1*14:01:01 | Brazil Rio de Janeiro Parda | 0.59 | 170 | 22_54_S_43_12_W |
| 9 | A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:11:01 | Costa Rica Guanacaste Mestizo (G) | 0.45 | 110 | 10_16_N_85_37_W |
| 10 | A*02:33-B*45:01-C*16:01:01-DRB1*04:11:01 | Costa Rica Guanacaste Mestizo (G) | 0.45 | 110 | 10_16_N_85_37_W |
| 11 | A*24:02:01-B*35:17:01-C*04:01:01-DRB1*04:11:01 | Costa Rica Guanacaste Mestizo (G) | 0.45 | 110 | 10_16_N_85_37_W |
| 12 | A*02:06:01-B*51:01:01-C*03:04:01-DRB1*04:11:01-DQB1*06:02 | Costa Rica Central Valley Mestizo (G) | 0.45 | 221 | 9_55_N_84_5_W |
| 13 | A*02:01:01-B*39:02:02-C*15:09-DRB1*04:11:01 | Costa Rica Amerindians (G) | 0.42 | 125 | 9_34_N_83_25_W |
| 14 | A*24:02:01-B*35:12:01-C*04:01:01-DRB1*04:11:01 | Costa Rica Amerindians (G) | 0.41 | 125 | 9_34_N_83_25_W |
| 15 | A*24:02:01-B*51:01:01-C*08:01:01-DRB1*04:11:01 | Costa Rica Amerindians (G) | 0.41 | 125 | 9_34_N_83_25_W |
| 16 | A*02:06:01-B*51:01:01-C*08:01:01-DRB1*04:11:01 | Costa Rica Amerindians (G) | 0.40 | 125 | 9_34_N_83_25_W |
| 17 | A*02:06:01-B*52:01:02-C*03:03:01-DRB1*04:11:01 | Costa Rica Amerindians (G) | 0.40 | 125 | 9_34_N_83_25_W |
| 18 | A*36:01-B*18:01:01-C*07:04:01-DRB1*04:11:01 | Costa Rica Amerindians (G) | 0.40 | 125 | 9_34_N_83_25_W |
| 19 | A*02:01:01-B*15:01:01-C*03:03:01-DRB1*04:11:01-DQB1*03:02:01-DPA1*01:03:01-DPB1*04:02:01 | Brazil Rio de Janeiro Caucasian | 0.39 | 521 | 22_54_S_43_12_W |
| 20 | A*02:01:01-B*39:11-C*07:02:01-DRB1*04:11:01-DQB1*03:02 | Costa Rica Central Valley Mestizo (G) | 0.32 | 221 | 9_55_N_84_5_W |
| 21 | A*02:01:01-B*35:01:01-C*15:09-DRB1*04:11:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 22 | A*02:01:01-B*51:01:01-C*15:02:01-DRB1*04:11:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 23 | A*02:06:01-B*35:01:01-C*07:02:01-DRB1*04:11:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 24 | A*02:06:01-B*51:01:01-C*03:04:01-DRB1*04:11:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 25 | A*02:33-B*52:01:02-C*03:03:01-DRB1*04:11:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 26 | A*03:01:01-B*40:02:01-C*03:04:01-DRB1*04:11:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 27 | A*26:01:01-B*58:01:01-C*03:04:01-DRB1*04:11:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 28 | A*31:01:02-B*51:02:01-C*07:01:01-DRB1*04:11:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 29 | A*68:01:02-B*52:01:02-C*02:02:02-DRB1*04:11:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 30 | A*11:01:01-B*27:02:01-C*03:04:01-DRB1*04:11:01-DQB1*03:02:01-DPA1*02:01:01-DPB1*14:01:01 | Brazil Barra Mansa Rio State Caucasian | 0.31 | 405 | 22_32_S_44_10_W |
| 31 | A*02:01:01-B*15:15-C*01:02:01-DRB1*04:11:01-DQB1*03:02 | Costa Rica Central Valley Mestizo (G) | 0.23 | 221 | 9_55_N_84_5_W |
| 32 | A*02:01:01-B*51:04:01-C*03:04:01-DRB1*04:11:01-DQB1*03:02:01-DPA1*02:01:01-DPB1*04:02:01 | Brazil Rio de Janeiro Caucasian | 0.19 | 521 | 22_54_S_43_12_W |
| 33 | A*23:01:01-B*48:02:01-C*06:02:01-DRB1*04:11:01-DQB1*05:01:01-DPA1*01:03:01-DPB1*04:02:01 | Brazil Rio de Janeiro Caucasian | 0.19 | 521 | 22_54_S_43_12_W |
| 34 | A*25:01:01-B*40:129-C*12:03:01-DRB1*04:11:01-DQB1*06:03:01-DPA1*01:03:01-DPB1*04:01:01 | Brazil Rio de Janeiro Caucasian | 0.19 | 521 | 22_54_S_43_12_W |
| 35 | A*30:02:01-B*18:01:01-C*05:01:01-DRB1*04:11:01-DQB1*02:01:01-DPA1*01:03:01-DPB1*04:02:01 | Brazil Rio de Janeiro Caucasian | 0.19 | 521 | 22_54_S_43_12_W |
| 36 | A*31:01:02-B*40:02:01-C*15:02:01-DRB1*04:11:01-DQB1*03:02:01-DPA1*01:03:01-DPB1*14:01:01 | Brazil Rio de Janeiro Caucasian | 0.19 | 521 | 22_54_S_43_12_W |
| 37 | A*68:01:01-B*51:01:01-C*03:04:01-DRB1*04:11:01-DQB1*03:02:01-DPA1*02:01:02-DPB1*01:01:01 | Brazil Rio de Janeiro Caucasian | 0.19 | 521 | 22_54_S_43_12_W |
| 38 | A*03:01:01-B*15:15-C*01:02:01-DRB1*04:11:01-DQB1*06:02 | Costa Rica Central Valley Mestizo (G) | 0.13 | 221 | 9_55_N_84_5_W |
| 39 | A*68:03:01-B*35:17:01-C*04:01:01-DRB1*04:11:01-DQB1*06:02 | Costa Rica Central Valley Mestizo (G) | 0.11 | 221 | 9_55_N_84_5_W |
| 40 | A*02:11:01-B*48:02:01-C*04:01:01-DRB1*04:11:01-DQB1*03:02 | Costa Rica Central Valley Mestizo (G) | 0.11 | 221 | 9_55_N_84_5_W |
| 41 | A*68:03:01-B*35:17:01-C*04:01:01-DRB1*04:11:01-DQB1*03:02 | Costa Rica Central Valley Mestizo (G) | 0.11 | 221 | 9_55_N_84_5_W |
| 42 | A*31:01:02-B*35:12:01-C*04:01:01-DRB1*04:11:01-DQB1*04:02:01 | Costa Rica Central Valley Mestizo (G) | 0.10 | 221 | 9_55_N_84_5_W |
| 43 | A*02:11:01-B*48:02:01-C*04:01:01-DRB1*04:11:01-DQB1*04:02:01 | Costa Rica Central Valley Mestizo (G) | 0.09 | 221 | 9_55_N_84_5_W |
| 44 | A*03:01:01-B*15:15-C*01:02:01-DRB1*04:11:01-DQB1*04:02:01 | Costa Rica Central Valley Mestizo (G) | 0.08 | 221 | 9_55_N_84_5_W |
| 45 | A*31:01:02-B*35:12:01-C*04:01:01-DRB1*04:11:01-DQB1*06:02 | Costa Rica Central Valley Mestizo (G) | 0.07 | 221 | 9_55_N_84_5_W |
| 46 | A*02:01:01-B*39:11-C*07:02:01-DRB1*04:11:01-DQB1*04:02:01 | Costa Rica Central Valley Mestizo (G) | 0.06 | 221 | 9_55_N_84_5_W |
| 47 | A*02:01:01-B*39:11-C*07:02:01-DRB1*04:11:01-DQB1*06:02 | Costa Rica Central Valley Mestizo (G) | 0.06 | 221 | 9_55_N_84_5_W |
| 48 | A*31:01:02-B*35:12:01-C*04:01:01-DRB1*04:11:01-DQB1*03:02 | Costa Rica Central Valley Mestizo (G) | 0.06 | 221 | 9_55_N_84_5_W |
| 49 | A*03:01:01-B*15:15-C*01:02:01-DRB1*04:11:01-DQB1*03:02 | Costa Rica Central Valley Mestizo (G) | 0.02 | 221 | 9_55_N_84_5_W |
| 50 | A*02:11:01-B*48:02:01-C*04:01:01-DRB1*04:11:01-DQB1*06:02 | Costa Rica Central Valley Mestizo (G) | 0.02 | 221 | 9_55_N_84_5_W |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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