Line |
Haplotype |
Population |
Frequency (%) |
Sample Size |
Location |
1 | A*02:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India West UCBB | 0.08 | 5,829 | 19_11_N_73_3_E |
2 | A*02:01-B*40:23-C*03:04-DRB1*09:01-DQA1*03:01-DQB1*03:02-DPB1*09:01 | Sri Lanka Colombo | 0.07 | 714 | 6_56_N_79_50_E |
3 | A*02:01-B*40:23-C*04:01-DRB1*01:01-DQA1*01:01-DQB1*02:02-DPB1*09:01 | Sri Lanka Colombo | 0.07 | 714 | 6_56_N_79_50_E |
4 | A*02:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India North UCBB | 0.03 | 5,849 | 28_36_N_77_11_E |
5 | A*31:01-B*40:23 | USA Asian pop 2 | 0.03 | 1,772 | 44_58_N_93_15_W |
6 | B*40:23-C*03:04 | USA Asian pop 2 | 0.03 | 1,772 | 44_58_N_93_15_W |
7 | A*02:01-B*40:23-C*03:04-DRB1*01:01-DQB1*05:01 | India North UCBB | 0.03 | 5,849 | 28_36_N_77_11_E |
8 | A*11:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India North UCBB | 0.03 | 5,849 | 28_36_N_77_11_E |
9 | A*03:02-B*40:23-C*03:04-DRB1*04:03-DQB1*03:02 | India Central UCBB | 0.02 | 4,204 | 27_1_N_81_19_E |
10 | A*01:01-B*40:23-C*03:04-DRB1*15:01-DQB1*06:02 | India East UCBB | 0.02 | 2,403 | 22_25_N_88_18_E |
11 | A*02:01-B*40:23-C*03:04-DRB1*01:01-DQB1*05:01 | India East UCBB | 0.02 | 2,403 | 22_25_N_88_18_E |
12 | A*02:01-B*40:23-C*03:02-DRB1*09:01-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
13 | A*02:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
14 | A*02:01-B*40:23-C*03:04-DRB1*15:03-DQB1*06:01 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
15 | A*02:16-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
16 | A*26:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
17 | A*01:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India South UCBB | 0.02 | 11,446 | 13_6_N_80_8_E |
18 | A*26:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India North UCBB | 0.02 | 5,849 | 28_36_N_77_11_E |
19 | A*26:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
20 | A*02:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
21 | A*02:01-B*40:23-C*03:04-DRB1*03:01-DQB1*02:01 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
22 | A*02:01-B*40:23-C*03:04-DRB1*08:03-DQB1*03:01 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
23 | A*02:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
24 | A*11:01-B*40:23-C*03:04-DRB1*04:04-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
25 | A*24:02-B*40:23-C*03:04-DRB1*01:01-DQB1*05:01 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
26 | A*26:01-B*40:23-C*03:04-DRB1*04:04-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
27 | A*26:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
28 | A*33:03-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
29 | A*26:01-B*40:23-C*03:04-DRB1*01:01-DQB1*05:01 | USA Asian pop 2 | 0.01 | 1,772 | 44_58_N_93_15_W |
30 | A*26:01-B*40:23-C*03:04-DRB1*14:04-DQB1*05:03 | USA Asian pop 2 | 0.01 | 1,772 | 44_58_N_93_15_W |
31 | A*31:01-B*40:23-C*03:04-DRB1*01:01-DQB1*05:01 | USA Asian pop 2 | 0.01 | 1,772 | 44_58_N_93_15_W |
32 | A*31:01-B*40:23-C*03:04-DRB1*14:04-DQB1*05:03 | USA Asian pop 2 | 0.01 | 1,772 | 44_58_N_93_15_W |
33 | A*11:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
34 | A*02:01-B*40:23-C*03:04-DRB1*03:01-DQB1*02:01 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
35 | A*26:01-B*40:23-C*03:04-DRB1*13:01-DQB1*06:03 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
36 | A*02:01-B*40:23-C*03:04-DRB1*03:01-DQB1*02:01 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
37 | A*02:01-B*40:23-C*03:04-DRB1*14:04-DQB1*05:23 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
38 | A*02:01-B*40:23-C*03:04-DRB1*15:06-DQB1*05:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
39 | A*03:02-B*40:23-C*03:04-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
40 | A*24:02-B*40:23-C*03:04-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
41 | A*26:01-B*40:23-C*03:04-DRB1*14:04-DQB1*05:03 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
42 | A*33:03-B*40:23-C*03:04-DRB1*15:02-DQB1*03:01 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
43 | A*01:01-B*40:23-C*03:04-DRB1*07:01-DQB1*03:03 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
44 | A*02:01-B*40:23-C*03:04-DRB1*04:04-DQB1*03:02 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
45 | A*02:01-B*40:23-C*03:04-DRB1*07:01-DQB1*02:110 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
46 | A*02:01-B*40:23-C*03:04-DRB1*13:02-DQB1*06:04 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
47 | A*23:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
48 | A*02:01-B*40:23-C*03:04-DRB1*13:01-DQB1*06:03 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
49 | A*03:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
50 | A*02:01-B*40:23-C*03:04-DRB1*14:04-DQB1*05:03 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
51 | A*02:01-B*40:23-C*03:04-DRB1*15:06-DQB1*06:03 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
52 | A*02:11-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
53 | A*11:01-B*40:23-C*03:04-DRB1*07:01-DQB1*02:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
54 | A*24:02-B*40:23-C*03:04-DRB1*11:06-DQB1*03:01 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
55 | A*32:01-B*40:23-C*03:04-DRB1*09:01-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
56 | A*02:01-B*40:23-C*03:04-DRB1*03:01-DQB1*06:01 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
57 | A*02:01-B*40:23-C*03:04-DRB1*03:01-DQB1*06:03 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
58 | A*02:01-B*40:23-C*03:04-DRB1*03:02-DQB1*06:04 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |