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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*68:01-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 4.13 | 218 | 16_54_N_92_5_W |
| 2 | A*24:02-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 2.99 | 67 | 20_29_N_88_54_W |
| 3 | A*31:01-B*40:08-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 2.99 | 67 | 20_29_N_88_54_W |
| 4 | A*31:01-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 2.24 | 67 | 20_29_N_88_54_W |
| 5 | A*68-B*40:08-DRB1*04-DQB1*03:02 | Mexico Yucatan Rural | 1.12 | 132 | 21_16_N_89_31_W |
| 6 | A*24:02-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 7 | A*24:02-B*40:08-C*03:04-DRB1*04:11-DQA1*03:03-DQB1*04:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 8 | A*24:02-B*40:08-C*03:04-DRB1*14:06-DQA1*05:03-DQB1*03:01 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 9 | A*68:01-B*40:08-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 10 | A*68:01-B*40:08-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 11 | A*68:01-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 12 | A*68:01-B*40:08-C*03:04-DRB1*14:02-DQA1*05:03-DQB1*03:01 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 13 | A*68:01-B*40:08-C*03:04-DRB1*16:02-DQA1*05:05-DQB1*03:01 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 14 | A*31-B*40:08-DRB1*04-DQB1*03:02 | Mexico Campeche Rural | 1.06 | 47 | 18_6_N_89_48_W |
| 15 | A*02-B*40:08-DRB1*04-DQB1*03:02 | Mexico Chihuahua, Ciudad Juarez | 0.93 | 106 | 31_41_N_106_25_W |
| 16 | A*68:01-B*40:08-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.92 | 218 | 16_54_N_92_5_W |
| 17 | A*68-B*40:08-DRB1*04-DQB1*03:02 | Guatemala, Guatemala City Mixed Ancestry | 0.79 | 127 | 14_37_N_90_31_W |
| 18 | A*68-B*40:08-DRB1*04-DQB1*03:02 | Mexico Yucatan, Merida | 0.77 | 192 | 20_58_N_89_35_W |
| 19 | A*68:03-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 20 | A*68:03-B*40:08-C*03:04-DRB1*04:25-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 21 | A*31-B*40:08-DRB1*04-DQB1*03:02 | Mexico Tabasco Rural | 0.70 | 142 | 18_23_N_93_12_W |
| 22 | A*68-B*40:08-DRB1*14-DQB1*03:01 | Mexico Guanajuato, Leon | 0.64 | 78 | 21_7_N_101_41_W |
| 23 | A*02-B*40:08-DRB1*04-DQB1*03:02 | Mexico Mexico City East | 0.63 | 79 | 19_17_N_99_2_W |
| 24 | A*31-B*40:08-DRB1*04-DQB1*03:02 | Mexico Tabasco, Villahermosa | 0.61 | 82 | 17_59_N_92_56_W |
| 25 | A*31-B*40:08-DRB1*14-DQB1*03:01 | Mexico Morelos, Cuernavaca | 0.61 | 82 | 18_55_N_99_13_W |
| 26 | A*68-B*40:08-DRB1*04-DQB1*03:01 | Mexico Tabasco, Villahermosa | 0.61 | 82 | 17_59_N_92_56_W |
| 27 | A*31-B*40:08-DRB1*08-DQB1*04 | Mexico Zacatecas, Zacatecas city | 0.60 | 84 | 22_46_N_102_34_W |
| 28 | B*40:08-C*03:04 | USA Hispanic pop 2 | 0.55 | 1,999 | 44_58_N_93_15_W |
| 29 | A*02-B*40:08-DRB1*14-DQB1*03:01 | Mexico Sinaloa Rural | 0.55 | 183 | 25_21_N_107_33_W |
| 30 | A*02-B*40:08-DRB1*04-DQB1*03:02 | Mexico Yucatan, Merida | 0.51 | 192 | 20_58_N_89_35_W |
| 31 | A*24-B*40:08-DRB1*04-DQB1*03:02 | Mexico Zacatecas, Fresnillo | 0.48 | 103 | 23_10_N_102_52_W |
| 32 | A*31:01:02-B*40:08-C*03:04:01-DRB1*04:03:01 | Costa Rica Guanacaste Mestizo (G) | 0.45 | 110 | 10_16_N_85_37_W |
| 33 | A*02-B*40:08-DRB1*04-DQB1*03:02 | Mexico Chiapas Rural | 0.41 | 121 | 16_47_N_92_41_W |
| 34 | A*02-B*40:08-DRB1*04-DQB1*03:02 | Mexico Mexico City North | 0.40 | 751 | 19_29_N_99_7_W |
| 35 | A*68-B*40:08-DRB1*13-DQB1*03:01 | Guatemala, Guatemala City Mixed Ancestry | 0.39 | 127 | 14_37_N_90_31_W |
| 36 | A*68-B*40:08-DRB1*14:02-DQB1*03:01 | Guatemala, Guatemala City Mixed Ancestry | 0.39 | 127 | 14_37_N_90_31_W |
| 37 | A*31-B*40:08-DRB1*14-DQB1*03:01 | Mexico Tabasco Rural | 0.35 | 142 | 18_23_N_93_12_W |
| 38 | A*02-B*40:08-DRB1*16-DQB1*03:01 | Mexico Mexico City Metropolitan Area Rural | 0.33 | 150 | 19_7_N_98_45_W |
| 39 | A*68-B*40:08-DRB1*14-DQB1*03:01 | Mexico Mexico City Metropolitan Area Rural | 0.33 | 150 | 19_7_N_98_45_W |
| 40 | A*31-B*40:08-DRB1*08-DQB1*04 | Mexico Durango, Durango city | 0.32 | 153 | 24_1_N_104_39_W |
| 41 | A*02:06:01-B*40:08-C*15:02:01-DRB1*04:04:01 | Nicaragua Mestizo (G) | 0.32 | 155 | 12_40_N_85_13_W |
| 42 | A*68-B*40:08-DRB1*04-DQB1*03:02 | Mexico Guanajuato Rural | 0.31 | 162 | 20_54_N_100_44_W |
| 43 | A*02-B*40:08-DRB1*14-DQB1*03:01 | Mexico Durango Rural | 0.31 | 326 | 26_41_N_103_44_W |
| 44 | A*68-B*40:08-DRB1*08-DQB1*04 | Mexico Durango Rural | 0.31 | 326 | 26_41_N_103_44_W |
| 45 | A*02-B*40:08-DRB1*14-DQB1*03:01 | Mexico Mexico City North | 0.27 | 751 | 19_29_N_99_7_W |
| 46 | A*24-B*40:08-DRB1*04-DQB1*03:02 | Mexico Yucatan, Merida | 0.26 | 192 | 20_58_N_89_35_W |
| 47 | A*24-B*40:08-DRB1*04-DQB1*03:02 | Mexico Coahuila, Torreon | 0.25 | 396 | 25_32_N_103_24_W |
| 48 | A*31:01-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 49 | A*68:01-B*40:08-C*03:04-DRB1*04:03-DQA1*04:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 50 | A*68:01-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:01 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 51 | A*68:01-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*105:01 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 52 | A*68:01-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 53 | A*68:01-B*40:08-C*03:04-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 54 | A*68:01-B*40:08-C*03:04-DRB1*11:04-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 55 | A*68-B*40:08-DRB1*04-DQB1*03:02 | Mexico Coahuila Rural | 0.23 | 216 | 26_59_N_102_3_W |
| 56 | A*31-B*40:08-DRB1*14-DQB1*03:01 | Mexico Nuevo Leon Rural | 0.23 | 439 | 25_37_N_100_14_W |
| 57 | A*24:02-B*40:08-C*03:04-DRB1*04:02-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 58 | A*24:02-B*40:08-C*06:02-DRB1*07:01-DQA1*02:01-DQB1*03:02-DPB1*02:01 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 59 | A*26:01-B*40:08-C*12:03-DRB1*04:02-DQA1*03:01-DQB1*03:02-DPB1*04:01 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 60 | A*31:01-B*40:08-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 61 | A*31:01-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 62 | A*02-B*40:08-DRB1*08-DQB1*04 | Ecuador Coast Mixed Ancestry | 0.21 | 238 | 2_11_S_79_53_W |
| 63 | B*40:08-C*03:04 | Mexico Mexico City Mestizo pop 2 | 0.21 | 234 | 19_26_N_99_8_W |
| 64 | A*02-B*40:08-DRB1*04-DQB1*03:02 | Mexico Chihuahua Rural | 0.21 | 236 | 27_18_N_107_53_W |
| 65 | A*24:02-B*40:08-C*07:01-DRB1*04:11-DQB1*03:02-DPB1*04:02 | Panama | 0.19 | 462 | 8_59_N_79_37_W |
| 66 | A*02-B*40:08-DRB1*04-DQB1*03:02 | Mexico Zacatecas Rural | 0.19 | 266 | 22_46_N_102_7_W |
| 67 | A*68-B*40:08-DRB1*14-DQB1*03:01 | Mexico Zacatecas Rural | 0.19 | 266 | 22_46_N_102_7_W |
| 68 | A*68:01-B*40:08 | USA Hispanic pop 2 | 0.18 | 1,999 | 44_58_N_93_15_W |
| 69 | A*31:01-B*40:08 | USA Hispanic pop 2 | 0.15 | 1,999 | 44_58_N_93_15_W |
| 70 | A*24-B*40:08-DRB1*04-DQB1*03:02 | Mexico Michoacan Rural | 0.14 | 348 | 19_38_N_101_38_W |
| 71 | A*31:01-B*40:08-C*03:04-DRB1*14:06-DQB1*03:01 | USA Hispanic pop 2 | 0.14 | 1,999 | 44_58_N_93_15_W |
| 72 | A*31-B*40:08-DRB1*14-DQB1*03:01 | Mexico Mexico City North | 0.13 | 751 | 19_29_N_99_7_W |
| 73 | A*68:01-B*40:08-C*03:04-DRB1*04:07-DQB1*03:02 | USA Hispanic pop 2 | 0.13 | 1,999 | 44_58_N_93_15_W |
| 74 | A*02-B*40:08-DRB1*08-DQB1*04 | Mexico Jalisco, Guadalajara city | 0.13 | 1,189 | 20_39_N_103_20_W |
| 75 | A*68-B*40:08-DRB1*14-DQB1*03:01 | Mexico Coahuila, Torreon | 0.13 | 396 | 25_32_N_103_24_W |
| 76 | A*68-B*40:08-DRB1*14-DQB1*03:02 | Mexico Coahuila, Torreon | 0.13 | 396 | 25_32_N_103_24_W |
| 77 | A*02:06-B*40:08 | USA Hispanic pop 2 | 0.12 | 1,999 | 44_58_N_93_15_W |
| 78 | A*68-B*40:08-DRB1*08-DQB1*04 | Mexico Nuevo Leon Rural | 0.11 | 439 | 25_37_N_100_14_W |
| 79 | A*68:01-B*40:08-C*03:04-DRB1*04:11-DQB1*03:02 | USA Hispanic pop 2 | 0.09 | 1,999 | 44_58_N_93_15_W |
| 80 | A*24-B*40:08-DRB1*04-DQB1*03:02 | Mexico Veracruz Rural | 0.09 | 539 | 18_26_N_95_12_W |
| 81 | A*02-B*40:08-DRB1*07-DQB1*02 | Mexico Jalisco Rural | 0.09 | 585 | 20_52_N_103_50_W |
| 82 | A*31-B*40:08-DRB1*04-DQB1*03:02 | Mexico Jalisco Rural | 0.09 | 585 | 20_52_N_103_50_W |
| 83 | A*68-B*40:08-DRB1*04-DQB1*03:02 | Mexico Jalisco Rural | 0.09 | 585 | 20_52_N_103_50_W |
| 84 | A*24-B*40:08-DRB1*04-DQB1*03:02 | Mexico Mexico City North | 0.07 | 751 | 19_29_N_99_7_W |
| 85 | A*31-B*40:08-DRB1*04-DQB1*03:02 | Mexico Mexico City North | 0.07 | 751 | 19_29_N_99_7_W |
| 86 | A*68-B*40:08-DRB1*04-DQB1*03:02 | Mexico Mexico City North | 0.07 | 751 | 19_29_N_99_7_W |
| 87 | A*02-B*40:08-DRB1*04-DQB1*03:01 | Mexico Puebla Rural | 0.06 | 833 | 19_57_N_97_38_W |
| 88 | A*02-B*40:08-DRB1*04-DQB1*03:02 | Mexico Puebla Rural | 0.06 | 833 | 19_57_N_97_38_W |
| 89 | A*68-B*40:08-DRB1*16-DQB1*03:02 | Mexico Puebla Rural | 0.06 | 833 | 19_57_N_97_38_W |
| 90 | A*02:01-B*40:08-C*03:04-DRB1*04:07-DQB1*03:02 | USA Hispanic pop 2 | 0.06 | 1,999 | 44_58_N_93_15_W |
| 91 | A*02:01-B*40:08 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 92 | A*30-B*40:08-DRB1*04-DQB1*03:02 | Mexico Puebla, Puebla city | 0.05 | 1,994 | 19_2_N_98_12_W |
| 93 | A*02:01-B*40:08-C*03:04-DRB1*08:02-DQB1*04:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 94 | A*02:06-B*40:08-C*03:04-DRB1*14:02-DQB1*03:01 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 95 | A*11:01-B*40:08-C*03:04-DRB1*04:03-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 96 | A*24:25-B*40:08-C*03:04-DRB1*04:03-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 97 | A*68:05-B*40:08-C*03:04-DRB1*04:02-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 98 | A*02-B*40:08-DRB1*08-DQB1*04 | Ecuador Mixed Ancestry | 0.04 | 1,173 | 0_10_S_78_28_W |
| 99 | A*02-B*40:08-DRB1*04-DQB1*03:02 | Mexico Jalisco, Guadalajara city | 0.04 | 1,189 | 20_39_N_103_20_W |
| 100 | A*02-B*40:08-DRB1*14-DQB1*03:01 | Mexico Jalisco, Guadalajara city | 0.04 | 1,189 | 20_39_N_103_20_W |
| 101 | A*68-B*40:08-DRB1*04-DQB1*03:02 | Mexico Jalisco, Guadalajara city | 0.04 | 1,189 | 20_39_N_103_20_W |
| 102 | A*01:01-B*40:08-C*02:02-DRB1*11:28 | Germany DKMS - Austria minority | 0.03 | 1,698 | 48_31_N_9_3_E |
| 103 | A*24:25-B*40:08 | USA Hispanic pop 2 | 0.03 | 1,999 | 44_58_N_93_15_W |
| 104 | A*68:05-B*40:08 | USA Hispanic pop 2 | 0.03 | 1,999 | 44_58_N_93_15_W |
| 105 | A*31:01-B*40:08-C*03:04-DRB1*04:07-DQB1*03:02 | USA Hispanic pop 2 | 0.02 | 1,999 | 44_58_N_93_15_W |
| 106 | A*31:01-B*40:08-C*03:04-DRB1*14:02-DQB1*03:01 | USA Hispanic pop 2 | 0.02 | 1,999 | 44_58_N_93_15_W |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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