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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*24:02-B*40:03-C*03:04-DRB1*12:01 | China Yunnan Province Han | 4.00 | 101 | 24_2_N_105_3_E |
| 2 | A*24:02-B*40:03-C*01:02-DRB1*04:07-DQB1*03:02 | Colombia North Wiwa El Encanto | 1.92 | 52 | 10_10_N_73_53_W |
| 3 | A*68:06-B*40:03-C*03:03-DRB1*14:02-DQB1*03:02 | Colombia North Wiwa El Encanto | 0.96 | 52 | 10_10_N_73_53_W |
| 4 | A*02-B*40:03-DRB1*15-DQB1*06 | Mexico Sonora, Ciudad Obregón | 0.70 | 143 | 27_28_N_109_55_W |
| 5 | A*24:02-B*40:03-DRB1*04:07-DQB1*03:02 | Mexico Veracruz Xalapa | 0.60 | 84 | 19_32_N_96_55_W |
| 6 | A*68:01:02-B*40:03-DRB1*08:02-DQB1*04:02 | Peru Titikaka Lake Uros | 0.48 | 105 | 15_50_S_70_1_W |
| 7 | A*30-B*40:03-DRB1*04-DQB1*04 | Mexico Veracruz, Xalapa | 0.27 | 187 | 19_32_N_96_54_W |
| 8 | A*68-B*40:03-DRB1*08-DQB1*04 | Mexico Coahuila Rural | 0.23 | 216 | 26_59_N_102_3_W |
| 9 | B*40:03-C*03:04 | USA Asian pop 2 | 0.23 | 1,772 | 44_58_N_93_15_W |
| 10 | A*26:01-B*40:03-C*03:04-DRB1*08:03-DQB1*03:01 | Malaysia Peninsular Indian | 0.18 | 271 | 3_9_N_101_57_E |
| 11 | A*02:01-B*40:03 | USA Asian pop 2 | 0.14 | 1,772 | 44_58_N_93_15_W |
| 12 | A*68-B*40:03-DRB1*14-DQB1*03:01 | Mexico Nuevo Leon Rural | 0.11 | 439 | 25_37_N_100_14_W |
| 13 | A*02:01-B*40:03-C*03:04-DRB1*12:02-DQB1*03:01 | USA Asian pop 2 | 0.09 | 1,772 | 44_58_N_93_15_W |
| 14 | A*24-B*40:03-DRB1*08-DQB1*04 | Mexico Jalisco Rural | 0.09 | 585 | 20_52_N_103_50_W |
| 15 | A*33:03-B*40:03-C*03:04-DRB1*14:05 | Japan pop 16 | 0.07 | 18,604 | 35_41_N_139_46_E |
| 16 | A*24:02:01-B*40:03:01-C*03:04:01-DRB1*14:05:01-DQB1*05:03:01 | China Zhejiang Han | 0.07 | 1,734 | 27_2_N_118_1_E |
| 17 | A*02:01-B*40:03-C*03:04-DRB1*14:05 | Germany DKMS - China minority | 0.06 | 1,282 | 48_31_N_9_3_E |
| 18 | A*11:01-B*40:03-C*03:04-DRB1*14:05 | Germany DKMS - China minority | 0.06 | 1,282 | 48_31_N_9_3_E |
| 19 | A*11:01:01-B*40:03:01-C*03:04:01-DRB1*14:05:01-DQB1*05:03:01 | China Zhejiang Han | 0.05 | 1,734 | 27_2_N_118_1_E |
| 20 | A*02:06-B*40:03-C*03:04-DRB1*12:01-DQB1*03:01 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
| 21 | A*24:02-B*40:03-C*03:04-DRB1*12:02-DQB1*03:01 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
| 22 | A*33:03-B*40:03-C*03:04-DRB1*04:10-DQB1*04:02 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
| 23 | A*24:02-B*40:03-C*03:04-DRB1*12:01 | Japan pop 16 | 0.04 | 18,604 | 35_41_N_139_46_E |
| 24 | A*24:02-B*40:03-C*03:04-DRB1*14:05 | Japan pop 16 | 0.04 | 18,604 | 35_41_N_139_46_E |
| 25 | A*02:01-B*40:03-C*03:03-DRB1*12:02 | Germany DKMS - China minority | 0.04 | 1,282 | 48_31_N_9_3_E |
| 26 | A*11:01-B*40:03-C*03:04-DRB1*15:01 | Germany DKMS - China minority | 0.04 | 1,282 | 48_31_N_9_3_E |
| 27 | A*24:02-B*40:03-C*07:56-DRB1*04:05 | Germany DKMS - China minority | 0.04 | 1,282 | 48_31_N_9_3_E |
| 28 | A*02:22-B*40:03-C*03:04-DRB1*04:04-DQB1*03:02 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 29 | A*01:01-B*40:03-C*01:02-DRB1*12:01-DQB1*03:01 | Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, | 0.03 | 4,335 | 41_22_N_2_11_E |
| 30 | A*24:02:01:01-B*40:03-C*03:04:01-DRB1*14:05:01-DQB1*02:02 | Russia Nizhny Novgorod, Russians | 0.03 | 1,510 | 56_19_N_43_59_E |
| 31 | A*02:01-B*40:03-C*03:04-DRB1*14:05 | Japan pop 16 | 0.03 | 18,604 | 35_41_N_139_46_E |
| 32 | A*02:01-B*40:03-C*03:04-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 33 | A*02:06-B*40:03 | USA Asian pop 2 | 0.03 | 1,772 | 44_58_N_93_15_W |
| 34 | A*02:06-B*40:03-C*03:04-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*01:03-DPB1*02:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 35 | A*24:02-B*40:03 | USA Asian pop 2 | 0.03 | 1,772 | 44_58_N_93_15_W |
| 36 | A*24:02-B*40:03-C*03:04-DRB1*08:02-DQA1*04:01-DQB1*03:02-DPA1*01:03-DPB1*02:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 37 | A*24:02-B*40:03-C*03:04-DRB1*12:01-DQA1*05:08-DQB1*03:01-DPA1*02:02-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 38 | A*26:01-B*40:03-C*03:04-DRB1*08:03-DQA1*01:03-DQB1*06:01-DPA1*02:02-DPB1*02:02 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 39 | A*26:01-B*40:03-C*03:04-DRB1*12:01-DQA1*05:08-DQB1*03:01-DPA1*02:02-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 40 | A*26:03-B*40:03-C*03:04-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*02:02-DPB1*03:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 41 | A*31:01-B*40:03-C*03:04-DRB1*15:01-DQA1*01:02-DQB1*06:02-DPA1*01:03-DPB1*04:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 42 | A*33:03-B*40:03-C*03:04-DRB1*14:05-DQA1*01:04-DQB1*05:03-DPA1*02:02-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 43 | A*02:01:01-B*40:03:01-C*01:02:01-DRB1*14:05:01-DQB1*05:03:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 44 | A*02:01:01-B*40:03:01-C*03:04:01-DRB1*04:10:01-DQB1*04:02:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 45 | A*02:01:01-B*40:03:01-C*03:04:01-DRB1*09:01:02-DQB1*03:03:02 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 46 | A*02:01:01-B*40:03:01-C*03:04:01-DRB1*11:01:01-DQB1*03:01:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 47 | A*24:02:01-B*40:03:01-C*03:04:01-DRB1*12:01:01-DQB1*03:01:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 48 | A*24:02:01-B*40:03:01-C*03:04:01-DRB1*15:02:01-DQB1*06:01:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 49 | A*33:03-B*40:03 | USA Asian pop 2 | 0.03 | 1,772 | 44_58_N_93_15_W |
| 50 | A*24:02-B*40:03-DRB1*15:01 | Hong Kong Chinese cord blood registry | 0.03 | 3,892 | 22_15_N_114_10_E |
| 51 | A*02:01-B*40:03-C*03:04-DRB1*09:01 | Japan pop 16 | 0.02 | 18,604 | 35_41_N_139_46_E |
| 52 | A*31:01-B*40:03-C*03:04-DRB1*04:10 | Japan pop 16 | 0.02 | 18,604 | 35_41_N_139_46_E |
| 53 | A*31:01-B*40:03-C*03:04-DRB1*14:05 | Japan pop 16 | 0.02 | 18,604 | 35_41_N_139_46_E |
| 54 | A*24:02:01-B*40:03:01-C*03:04:01-DRB1*14:05:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.02 | 5,266 | 22_25_N_114_17_E |
| 55 | A*24:02-B*40:03-C*03:04-DRB1*04:06 | Japan pop 16 | 0.02 | 18,604 | 35_41_N_139_46_E |
| 56 | A*02:01-B*40:03-C*03:04-DRB1*09:01 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 57 | A*02:01-B*40:03-C*03:04-DRB1*14:05 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 58 | A*11:01-B*40:03-C*03:04-DRB1*14:05 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 59 | A*24:02:01-B*40:03:01-C*03:04:01-DRB1*12:01:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 60 | A*24:02-B*40:03-C*03:04-DRB1*15:01 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 61 | A*24:02-B*40:03-DRB1*09:01 | Hong Kong Chinese cord blood registry | 0.01 | 3,892 | 22_15_N_114_10_E |
| 62 | A*24:02:01-B*40:03:01-C*03:04:01-DRB1*14:05:01-DPB1*02:01:02 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 63 | A*24:02-B*40:03-C*03:04-DRB1*12:01 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 64 | A*11:01-B*40:03-DRB1*11:01 | Hong Kong Chinese cord blood registry | 0.01 | 3,892 | 22_15_N_114_10_E |
| 65 | A*02:01-B*40:03-C*03:04-DRB1*01:01 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 66 | A*02:01-B*40:03-C*03:04-DRB1*04:05 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 67 | A*11:01-B*40:03-C*03:04-DRB1*12:01 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 68 | A*24:02-B*40:03-C*03:04-DRB1*08:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 69 | A*24:02-B*40:03-DRB1*12:02 | Hong Kong Chinese cord blood registry | 0.01 | 3,892 | 22_15_N_114_10_E |
| 70 | A*02:03-B*40:03-DRB1*14:05 | Hong Kong Chinese cord blood registry | 0.01 | 3,892 | 22_15_N_114_10_E |
| 71 | A*33:03:01-B*40:03:01-C*03:04:01-DRB1*14:05:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 72 | A*24:02-B*40:03-C*03:04-DRB1*09:01 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 73 | A*11:02-B*40:03-DRB1*09:01 | Hong Kong Chinese cord blood registry | 0.01 | 3,892 | 22_15_N_114_10_E |
| 74 | A*26:01-B*40:03-C*03:02-DRB1*08:09 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 75 | A*24:02:01-B*40:03:01-C*03:04:01-DRB1*15:01:01-DPB1*09:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 76 | A*24:02-B*40:03-C*03:04-DRB1*12:02 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 77 | A*02:01:01-B*40:03:01-C*03:04:01-DRB1*09:01:02-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 78 | A*02:01-B*40:03-C*03:04-DRB1*08:03 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 79 | A*02:01-B*40:03-C*03:04-DRB1*11:01 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 80 | A*02:01-B*40:03-C*03:04-DRB1*12:01 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 81 | A*02:01-B*40:03-C*03:04-DRB1*12:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 82 | A*02:01-B*40:03-C*03:04-DRB1*14:03 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 83 | A*02:01-B*40:03-C*03:04-DRB1*14:06 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 84 | A*02:01-B*40:03-C*03:04-DRB1*15:01 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 85 | A*02:01-B*40:03-C*08:01-DRB1*08:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 86 | A*02:06-B*40:03-C*03:04-DRB1*15:01 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 87 | A*11:01-B*40:03-C*03:04-DRB1*14:05 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 88 | A*24:02-B*40:03-C*03:04-DRB1*13:01 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 89 | A*24:02-B*40:03-C*03:04-DRB1*13:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 90 | A*26:01-B*40:03-C*03:04-DRB1*08:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 91 | A*26:01-B*40:03-C*03:04-DRB1*12:01 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 92 | A*31:01-B*40:03-C*03:04-DRB1*04:05 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 93 | A*31:01-B*40:03-C*03:04-DRB1*08:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 94 | A*31:01-B*40:03-C*03:04-DRB1*08:03 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 95 | A*31:01-B*40:03-C*03:04-DRB1*15:01 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 96 | A*31:01-B*40:03-C*04:01-DRB1*09:01 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 97 | A*24:02-B*40:03-C*03:04-DRB1*11:01 | Hong Kong Chinese BMDR | 0.00 | 7,595 | 22_15_N_114_10_E |
| 98 | B*40:03-C*03:04 | China Hubei Han | 0.00 | 3,732 | 30_45_N_114_15_E |
| 99 | A*33:01-B*40:03-DRB1*14:05 | Israel USSR Jews | 0.00 | 45,681 | 32_9_N_34_50_E |
| 100 | A*02:01-B*40:03 | China Hubei Han | 0.00 | 3,732 | 30_45_N_114_15_E |
| 101 | A*02:06-B*40:03 | China Hubei Han | 0.00 | 3,732 | 30_45_N_114_15_E |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
support@allelefrequencies.net