Allele Frequencies in World Populations

HLA » Haplotype Frequency Search

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Line Haplotype Population Frequency (%) Sample Size Location
1B*39:08-C*07:02Mexico Oaxaca Zapotec2.209017_5_N_96_45_W
2A*68:03-B*39:08-DRB1*08:02Mexico Mixtec2.109723_57_N_103_29_W
3A*68:03-B*39:08-DRB1*08:02Mexico Oaxaca Jamiltepec Mixtec2.089616_25_N_97_58_W
4A*02:01:01-B*39:08-C*07:02:01-DRB1*04:07Costa Rica Amerindians (G)2.001259_34_N_83_25_W
5B*39:08-C*07:02Mexico Oaxaca Mixtec1.0010317_5_N_96_45_W
6A*68:07-B*39:08-C*07:02:01-DRB1*14:02-DQB1*03:01Costa Rica Central Valley Mestizo (G)0.902219_55_N_84_5_W
7B*39:08-C*07:02Mexico Mexico City Mestizo pop 20.6423419_26_N_99_8_W
8A*68:01-B*39:08-DRB1*08:02Mexico Oaxaca Jamiltepec Mixtec0.529616_25_N_97_58_W
9A*02:06-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02Mexico Chiapas Lacandon Mayans0.4621816_54_N_92_5_W
10A*68:01:02-B*39:08-C*07:02:01-DRB1*08:02:01-DQB1*04:02:01Costa Rica Central Valley Mestizo (G)0.452219_55_N_84_5_W
11A*68:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02Nicaragua Managua0.4333912_7_N_86_10_W
12B*39:08-C*07:02-DRB1*04:07-DQB1*03:02Mexico Mexico City Mestizo pop 20.4323419_26_N_99_8_W
13A*24:02:01-B*39:08-C*03:04:01-DRB1*08:02:01Costa Rica Amerindians (G)0.411259_34_N_83_25_W
14A*68:03-B*39:08-C*07:17-DRB1*08:02-DQB1*04:02Mexico Mexico City Mestizo population0.3514319_25_N_99_7_W
15B*39:08-C*07:17Mexico Mexico City Mestizo population0.3514319_25_N_99_7_W
16B*39:08-C*07:17-DRB1*08:02-DQB1*04:02Mexico Mexico City Mestizo population0.3514319_25_N_99_7_W
17A*02:01:01-B*39:08-C*07:02:01-DRB1*01:02:01Nicaragua Mestizo (G)0.3215512_40_N_85_13_W
18A*02:01:01-B*39:08-C*07:02:01-DRB1*14:06:01Nicaragua Mestizo (G)0.3215512_40_N_85_13_W
19A*02:05:01-B*39:08-C*07:02:01-DRB1*08:02:01Nicaragua Mestizo (G)0.3215512_40_N_85_13_W
20A*30:02:01-B*39:08-C*07:01:01-DRB1*08:02:01Nicaragua Mestizo (G)0.3215512_40_N_85_13_W
21A*30:02:01-B*39:08-C*07:02:01-DRB1*14:06:01Nicaragua Mestizo (G)0.3215512_40_N_85_13_W
22A*31:01:02-B*39:08-C*07:02:01-DRB1*04:07Nicaragua Mestizo (G)0.3215512_40_N_85_13_W
23A*68:07-B*39:08-C*07:02:01-DRB1*09:01:02Nicaragua Mestizo (G)0.3215512_40_N_85_13_W
24A*02:06-B*39:08-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02Mexico Chiapas Lacandon Mayans0.2321816_54_N_92_5_W
25A*24:02-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02Mexico Chiapas Lacandon Mayans0.2321816_54_N_92_5_W
26A*24:02-B*39:08-C*07:02-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02Mexico Chiapas Lacandon Mayans0.2321816_54_N_92_5_W
27A*31:01-B*39:08-C*07:02-DRB1*04:07-DQA1*03:03-DQB1*03:02-DPA1*01:03-DPB1*04:02Mexico Chiapas Lacandon Mayans0.2321816_54_N_92_5_W
28A*02:01:01-B*39:08-C*07:02:01-DRB1*04:10:01-DQB1*04:02:01Costa Rica Central Valley Mestizo (G)0.232219_55_N_84_5_W
29A*02:01:01-B*39:08-C*07:02:01-DRB1*13:02:01-DQB1*06:04Costa Rica Central Valley Mestizo (G)0.232219_55_N_84_5_W
30A*24:02:01-B*39:08-C*07:02:01-DRB1*04:10:01-DQB1*04:02:01Costa Rica Central Valley Mestizo (G)0.232219_55_N_84_5_W
31A*30:02:01-B*39:08-C*04:01:01-DRB1*01:02:01-DQB1*05:01Costa Rica Central Valley Mestizo (G)0.232219_55_N_84_5_W
32A*03:01-B*39:08-C*07:02-DRB1*04:05-DQA1*03:01-DQB1*04:02-DPB1*04:02Nicaragua Managua0.2233912_7_N_86_10_W
33A*68:01-B*39:08-C*07:02-DRB1*04:01-DQA1*03:01-DQB1*03:02-DPB1*04:02Nicaragua Managua0.2233912_7_N_86_10_W
34A*68:03-B*39:08-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02Nicaragua Managua0.2233912_7_N_86_10_W
35A*68:03-B*39:08-C*07:17-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPB1*03:01Nicaragua Managua0.2233912_7_N_86_10_W
36A*68:07-B*39:08-C*07:02-DRB1*01:02-DQA1*05:01-DQB1*05:01-DPB1*04:02Nicaragua Managua0.2233912_7_N_86_10_W
37A*02:06-B*39:08-C*15:02-DRB1*16:11-DQB1*03:01-DPB1*04:02Panama0.194628_59_N_79_37_W
38A*23:01-B*39:08-C*02:10-DRB1*04:01-DQB1*04:02-DPB1*04:01Panama0.194628_59_N_79_37_W
39A*24:02-B*39:08-C*07:02-DRB1*04:05-DQB1*04:02-DPB1*14:01Panama0.194628_59_N_79_37_W
40A*31:01-B*39:08-C*04:01-DRB1*04:10-DQB1*04:02-DPB1*14:01Panama0.194628_59_N_79_37_W
41B*39:08-C*07:02USA Hispanic pop 20.181,99944_58_N_93_15_W
42A*02:01:01-B*39:08-C*07:02:01-DRB1*08:02:01Costa Rica Amerindians (G)0.111259_34_N_83_25_W
43A*02:01-B*39:08USA Hispanic pop 20.101,99944_58_N_93_15_W
44A*68:05-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02USA Hispanic pop 20.091,99944_58_N_93_15_W
45A*02:06:01-B*39:08-C*06:02:01-DRB1*15:01-DQB1*05:01Costa Rica Central Valley Mestizo (G)0.092219_55_N_84_5_W
46A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*06:02Costa Rica Central Valley Mestizo (G)0.092219_55_N_84_5_W
47A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*06:03Costa Rica Central Valley Mestizo (G)0.082219_55_N_84_5_W
48A*68:05-B*39:08USA Hispanic pop 20.081,99944_58_N_93_15_W
49A*02:06:01-B*39:08-C*06:02:01-DRB1*15:01-DQB1*03:02Costa Rica Central Valley Mestizo (G)0.072219_55_N_84_5_W
50A*24:14-B*39:08-C*07:02-DRB1*14:02-DQB1*03:01Colombia Bogotá Cord Blood0.071,4634_39_N_73_52_W
51A*02:06:01-B*39:08-C*06:02:01-DRB1*15:01-DQB1*06:02Costa Rica Central Valley Mestizo (G)0.062219_55_N_84_5_W
52A*24:02-B*39:08-C*07:02-DRB1*04:10-DQB1*04:02Colombia Bogotá Cord Blood0.061,4634_39_N_73_52_W
53A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*03:01Costa Rica Central Valley Mestizo (G)0.052219_55_N_84_5_W
54B*39:08-C*07:17USA Hispanic pop 20.051,99944_58_N_93_15_W
55A*02:01-B*39:08-C*07:02-DRB1*04:04-DQB1*03:02USA Hispanic pop 20.051,99944_58_N_93_15_W
56A*02:01-B*39:08-C*07:17-DRB1*04:10-DQB1*04:02USA Hispanic pop 20.051,99944_58_N_93_15_W
57A*68:03-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02USA Hispanic pop 20.051,99944_58_N_93_15_W
58A*68:07-B*39:08-C*07:02-DRB1*04:03-DQB1*03:02USA Hispanic pop 20.051,99944_58_N_93_15_W
59A*24:14-B*39:08-C*07:02-DRB1*04:10-DQB1*04:02Colombia Bogotá Cord Blood0.051,4634_39_N_73_52_W
60A*02:01-B*39:08-C*07:02-DRB1*16:02-DQB1*03:01Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
61A*02:22-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
62A*02:22-B*39:08-C*07:02-DRB1*11:01-DQB1*03:01Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
63A*24:14-B*39:08-C*07:02-DRB1*08:02-DQB1*04:02Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
64A*32:01-B*39:08-C*07:02-DRB1*04:05-DQB1*04:02Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
65A*33:03-B*39:08-C*07:02-DRB1*14:02-DQB1*03:01Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
66A*68:01-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02Colombia Bogotá Cord Blood0.031,4634_39_N_73_52_W
67A*68:03-B*39:08USA Hispanic pop 20.031,99944_58_N_93_15_W
68A*68:07-B*39:08USA Hispanic pop 20.031,99944_58_N_93_15_W
69A*02:01-B*39:08-C*07:02-DRB1*04:07-DQB1*03:02USA Hispanic pop 20.021,99944_58_N_93_15_W
70A*02:01-B*39:08-C*07:02-DRB1*04:11-DQB1*04:02USA Hispanic pop 20.021,99944_58_N_93_15_W
71A*11:01:01-B*39:08-C*07:04:01-DRB1*11:01-DQB1*05:01Costa Rica Central Valley Mestizo (G)0.012219_55_N_84_5_W



   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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