Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
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Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 78 (from 78) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo pop 2 3.4200234
 2  A*24:02-B*39:06-DRB1*14:06  Mexico Oaxaca Mixtec 3.0000103
 3  A*31:01-B*39:06-DRB1*14:06  Mexico Oaxaca Mixtec 3.0000103
 4  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo pop 2 2.5600234
 5  A*02-B*39-DRB1*14:06-DQB1*04:02  Mexico Sinaloa Capomos Mayo Yoremes 1.666760
 6  A*02:01-B*39:06-DRB1*14:06  Mexico Oaxaca Jamiltepec Mixtec 1.560096
 7  A*24:02-B*39:06-C*07:02-DRB1*14:06  USA Mexican American Mestizo 1.5000553
 8  B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo population 1.3986143
 9  A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01  USA NMDP Mexican or Chicano 1.0097261,235
 10  A*31-B*39-DRB1*14:06-DQB1*03:01  Mexico San Vicente Tancuayalab Teenek/Huastecos 0.940053
 11  A*01-B*39-DRB1*14:06-DQB1*03:01  Mexico Sinaloa Capomos Mayo Yoremes 0.833360
 12  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQA1*05:03-DQB1*03:01  Mexico Tixcacaltuyub Maya 0.746367
 13  A*68-B*39-DRB1*14:06-DQB1*03:01  Bolivia Quechua 0.720069
 14  A*24-B*39-DRB1*14:06  USA NMDP Hispanic 0.7000449,844
 15  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo population 0.6993143
 16  A*31:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo population 0.6993143
 17  A*02:01:01-B*39:01:01-C*07:01:01-DRB1*14:06:01-DQB1*03:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 18  A*24:02:01-B*39:01:01-C*07:01:01-DRB1*14:06:01-DQB1*03:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 19  A*24:02:01-B*39:06:01-C*07:01:01-DRB1*14:06:01-DQB1*03:01:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 20  A*24:02-B*39:06-DRB1*14:06-DQB1*03:01  Mexico Mexico City Tlalpan 0.6061330
 21  A*24:02-B*39:01-DRB1*14:06-DQB1*03:01  Mexico Veracruz Xalapa 0.595284
 22  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  USA Hispanic pop 2 0.53701,999
 23  A*02:01-B*39:01-DRB1*14:06  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 24  A*24:02-B*39:02-DRB1*14:06  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 25  A*24:02-B*39:06-DRB1*14:06  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 26  A*68:01-B*39:06-DRB1*14:06  Mexico Oaxaca Jamiltepec Mixtec 0.520096
 27  A*24:02-B*39:01-DRB1*14:06-DQB1*03:01  Mexico Mexico City Tlalpan 0.4545330
 28  B*39:05-C*07:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.4300234
 29  A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01  USA NMDP Hispanic South or Central American 0.4026146,714
 30  A*02-B*39-DRB1*14:06-DQB1*03:01  Guatemala, Guatemala City Mixed Ancestry 0.3900127
 31  A*24-B*39-DRB1*14:06-DQB1*03:01  Guatemala, Guatemala City Mixed Ancestry 0.3900127
 32  A*24-B*39-DRB1*14:06-DQB1*06  Guatemala, Guatemala City Mixed Ancestry 0.3900127
 33  A*31-B*39-DRB1*14:06-DQB1*06  Guatemala, Guatemala City Mixed Ancestry 0.3900127
 34  A*31:01-B*39:05-C*04:01-DRB1*14:06-DQA1*05:03-DQB1*03:01  Brazil Puyanawa 0.3333150
 35  A*02:01:01-B*39:02:02-C*02:02:02-DRB1*14:06:01  Nicaragua Mestizo (G) 0.3226155
 36  A*02:01:01-B*39:08-C*07:02:01-DRB1*14:06:01  Nicaragua Mestizo (G) 0.3226155
 37  A*02:06:01-B*39:06:02-C*07:02:01-DRB1*14:06:01  Nicaragua Mestizo (G) 0.3226155
 38  A*30:02:01-B*39:08-C*07:02:01-DRB1*14:06:01  Nicaragua Mestizo (G) 0.3226155
 39  A*02:01-B*39:01-DRB1*14:06-DQB1*03:01  Mexico Mexico City Tlalpan 0.3030330
 40  A*24:02-B*39:02-DRB1*14:06-DQB1*03:01  Mexico Mexico City Tlalpan 0.3030330
 41  A*68:01-B*39:01-DRB1*14:06-DQB1*03:01  Mexico Mexico City Tlalpan 0.3030330
 42  A*02-B*39-DRB1*14:06  USA NMDP Hispanic 0.3000449,844
 43  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQA1*01:02-DQB1*06:02-DPB1*03:01  USA San Diego 0.2600496
 44  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 45  A*02:01-B*39:05-C*02:02-DRB1*14:06-DQA1*03:01-DQB1*03:01-DPB1*01:01  Nicaragua Managua 0.2165339
 46  A*02:01:01-B*39:09:01-C*07:02:01-DRB1*14:06:01-DQB1*03:01:01-DPA1*01:03:01-DPB1*04:02:01  Brazil Rio de Janeiro Caucasian 0.1946521
 47  A*31:01-B*39:01-DRB1*14:06-DQB1*03:01  Mexico Mexico City Tlalpan 0.1515330
 48  A*02:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  USA Hispanic pop 2 0.13301,999
 49  A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  USA NMDP American Indian South or Central America 0.12845,926
 50  A*24-B*39-DRB1*14:06-DQB1*03:01  Mexico San Vicente Tancuayalab Teenek/Huastecos 0.100053
 51  A*31:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  USA Hispanic pop 2 0.09401,999
 52  A*01-B*39-DRB1*14:06-DQA1*05:03-DQB1*03:01  Brazil Paraná Caucasian 0.0780641
 53  A*02:06-B*39:01-C*07:02-DRB1*14:06-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 54  A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01  USA NMDP Caribean Hispanic 0.0613115,374
 55  A*23:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  USA Hispanic pop 2 0.05801,999
 56  A*03:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01  USA Hispanic pop 2 0.04701,999
 57  A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01  USA NMDP North American Amerindian 0.036235,791
 58  A*24:02-B*39:01-C*07:02-DRB1*14:06-DQA1*05:03-DQB1*03:01-DPA1*02:02-DPB1*38:01  Japan pop 17 0.03003,078
 59  A*31:01-B*39:01-C*07:02-DRB1*14:06-DQA1*05:03-DQB1*03:02-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 60  A*02:01-B*39:01-C*07:02-DRB1*14:06  Japan pop 16 0.026018,604
 61  A*02:06-B*39:01-C*07:02-DRB1*14:06  Japan pop 16 0.026018,604
 62  A*03:02-B*39:01-DRB1*14:06  Israel Libya Jews 0.02013,739
 63  A*02:01-B*39:02-C*07:02-DRB1*14:06  Japan pop 16 0.016018,604
 64  A*24:02-B*39:01-C*07:02-DRB1*14:06  Japan pop 16 0.016018,604
 65  A*31:01-B*39:23-C*07:02-DRB1*14:06  Japan pop 16 0.016018,604
 66  A*26:03-B*39:01-C*07:02-DRB1*14:06  Japan pop 16 0.010018,604
 67  A*31:01-B*39:01-C*07:02-DRB1*14:06  Japan pop 16 0.010018,604
 68  A*68:01-B*39:24-C*07:01-DRB1*14:06-DQB1*03:01  Germany DKMS - Turkey minority 0.01004,856
 69  A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01  USA NMDP Middle Eastern or North Coast of Africa 0.007670,890
 70  A*02:06-B*39:23-C*07:02-DRB1*14:06  Japan pop 16 0.005018,604
 71  A*02:07-B*39:01-C*07:02-DRB1*14:06  Japan pop 16 0.005018,604
 72  A*11:01-B*39:01-C*07:02-DRB1*14:06  Japan pop 16 0.005018,604
 73  A*26:02-B*39:01-C*07:02-DRB1*14:06  Japan pop 16 0.005018,604
 74  A*02:01-B*39:01-DRB1*14:06  Israel Arab pop 2 0.004112,301
 75  A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01  USA NMDP European Caucasian 0.00311,242,890
 76  A*24:02-B*39:01-DRB1*14:06  Israel Tunisia Jews 0.00289,070
 77  A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01  USA NMDP Filipino 0.002650,614
 78  A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01  USA NMDP African American pop 2 0.0014416,581

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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