Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 81 (from 81) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 11.940367
 2  A*68:03-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 7.290096
 3  B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 5.5944143
 4  B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 4.0600234
 5  A*24:02-B*39:05-DRB1*04:07  Mexico Mixtec 3.900097
 6  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 3.4404218
 7  A*24:02-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 3.410096
 8  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.985167
 9  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.7483143
 10  A*68:03-B*39:05-C*07:02-DRB1*04:07  USA Mexican American Mestizo 1.6000553
 11  A*02:06-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 1.560096
 12  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.3986143
 13  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.2800234
 14  A*68:01-B*39:05-DRB1*04:07  Mexico Oaxaca Jamiltepec Mixtec 1.280096
 15  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 1.1468218
 16  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 17  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 1.0700234
 18  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 19  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 20  A*32:01-B*39:05-C*17:01-DRB1*04:07-DQB1*06:04  Colombia North Chimila Amerindians 1.063847
 21  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 1.0523261,235
 22  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.0490143
 23  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 1.0490143
 24  A*68:05-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Amerindians (G) 0.8065125
 25  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.74801,999
 26  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 27  A*02:01:01-B*39:05:01-C*07:01:01-DRB1*04:07:01-DQB1*03:02:01  Mexico Hidalgo Mezquital Valley/ Otomi 0.694472
 28  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Mexican or Chicano 0.6700261,235
 29  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.6494339
 30  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Hispanic South or Central American 0.5534146,714
 31  A*11:01-B*39:05-C*04:01-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  USA San Diego 0.5210496
 32  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.46501,999
 33  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 34  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*03:01  Mexico Chiapas Lacandon Mayans 0.4587218
 35  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 36  A*02:11:01-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 37  A*68:03:01-B*39:05:01-C*07:02:01-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 38  A*31:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo population 0.3497143
 39  A*31:01:02-B*39:05:01-C*07:02:01-DRB1*04:07  Nicaragua Mestizo (G) 0.3226155
 40  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.28361,463
 41  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQB1*03:01  USA NMDP Hawaiian or other Pacific Islander 0.275911,499
 42  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Hispanic South or Central American 0.2584146,714
 43  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.23791,463
 44  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 45  A*02:06-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 46  A*24:02-B*39:05-C*04:01-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 47  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01  Mexico Chiapas Lacandon Mayans 0.2294218
 48  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*14:01  Mexico Chiapas Lacandon Mayans 0.2294218
 49  A*31:01-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 50  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:11-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 51  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*14:01  Mexico Chiapas Lacandon Mayans 0.2294218
 52  A*31:01:02-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*05:01  Costa Rica Central Valley Mestizo (G) 0.2262221
 53  A*02:01-B*39:05-C*01:02-DRB1*04:07-DQA1*03:01-DQB1*03:01-DPB1*04:01  Nicaragua Managua 0.2165339
 54  A*68:05-B*39:05-C*07:02-DRB1*04:07-DQA1*05:01-DQB1*03:01-DPB1*04:02  Nicaragua Managua 0.2165339
 55  A*68:03-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA NMDP American Indian South or Central America 0.16555,926
 56  A*01:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.13401,999
 57  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Caribean Hispanic 0.0774115,374
 58  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Caribean Hispanic 0.0732115,374
 59  A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*02:01  Costa Rica Central Valley Mestizo (G) 0.0702221
 60  A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*06:03  Costa Rica Central Valley Mestizo (G) 0.0702221
 61  A*02:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.05301,999
 62  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04901,999
 63  A*68:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 64  A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*05:01  Costa Rica Central Valley Mestizo (G) 0.0468221
 65  A*24:02-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.04131,463
 66  A*26:01-B*39:05-C*07:02-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.03421,463
 67  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP North American Amerindian 0.025135,791
 68  A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.0208221
 69  A*02:06:01-B*39:05:01-C*07:02:01-DRB1*04:07-DQB1*03:01  Costa Rica Central Valley Mestizo (G) 0.0182221
 70  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Filipino 0.009750,614
 71  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP North American Amerindian 0.009135,791
 72  A*68:01-B*39:05-C*07:02-DRB1*04:07  Japan pop 16 0.005018,604
 73  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP African American pop 2 0.0018416,581
 74  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Caribean Black 0.001733,328
 75  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Filipino 0.001350,614
 76  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP European Caucasian 0.00121,242,890
 77  A*68:03-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Middle Eastern or North Coast of Africa 0.001170,890
 78  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP European Caucasian 0.00066271,242,890
 79  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Chinese 0.000567099,672
 80  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP Middle Eastern or North Coast of Africa 0.000258070,890
 81  A*02:06-B*39:05-C*07:02-DRB1*04:07-DRB4*01:01-DQB1*03:02  USA NMDP African American pop 2 0.0000790416,581

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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