Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 100 (from 112) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*31:01-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 12.1560218
 2  B*40-C*03-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 4.166772
 3  A*68:01-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 4.1284218
 4  A*24:02-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.985167
 5  A*31:01-B*40:08-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.985167
 6  A*31:01-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.238867
 7  A*68:01-B*40:02-C*03:05-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 2.127747
 8  A*24-B*40-C*03-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 2.083372
 9  A*02:01-B*40:02-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 2.0000150
 10  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 1.7316339
 11  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 1.492567
 12  A*31-B*40-C*03-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 1.388972
 13  A*02:06-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*02:01  Mexico Chiapas Lacandon Mayans 1.3761218
 14  A*68:01-B*40:04-C*03:02/03:04-DRB1*04:03-DQA1*03:01:01-DQB1*03:01-DPA1*02-DPB1*04:02  Venezuela Sierra de Perija Yucpa 1.200073
 15  A*02:01-B*40:02-C*03:05-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 16  A*02:06-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 17  A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 18  A*24:02-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 19  A*31:01-B*40:02-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 20  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 21  A*31:01-B*40:02-C*03:05-DRB1*04:17-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 22  A*68:01-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 23  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 24  A*68:01-B*40:08-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 25  A*68:01-B*40:08-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 26  A*68:01-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 27  A*68:01-B*40:11-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 28  A*68:01-B*40:27-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 29  A*68:03-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 30  A*68:03-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 31  A*24:02-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 1.0000150
 32  A*68:01-B*40:08-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.9174218
 33  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.8658339
 34  A*11:01-B*40:01-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 35  A*24:02-B*40:02-C*03:05-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 36  A*31:01-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 37  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 38  A*68:03-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 39  A*68:03-B*40:08-C*03:04-DRB1*04:25-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 40  A*11-B*40-C*03-DRB1*04-DQA1*03-DQB1*03  Mexico Tapachula, Chiapas Mestizo Population 0.694472
 41  A*02:06-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.6881218
 42  A*31:01-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Mexico Chiapas Lacandon Mayans 0.6881218
 43  A*24:14-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 44  A*24:02-B*40:02-C*03:05-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.4329339
 45  A*02-B*40-C*03-DRB1*04-DQA1*03-DQB1*03  Spain, Castilla y Leon, Northwest, 0.38661,743
 46  A*02:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 0.3333150
 47  A*02:01-B*40:02-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:03  Brazil Puyanawa 0.3333150
 48  A*24:02-B*40:02-C*03:02-DRB1*04:11-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 0.3333150
 49  A*68:01-B*40:02-C*03:02-DRB1*04:10-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 0.3333150
 50  A*68:01-B*40:04-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 0.3333150
 51  A*31-B*40-C*03-DRB1*04-DQA1*03-DQB1*03  Spain, Castilla y Leon, Northwest, 0.26261,743
 52  A*68:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:02  USA San Diego 0.2600496
 53  A*11-B*40-C*03-DRB1*04-DQA1*03-DQB1*03  Spain, Castilla y Leon, Northwest, 0.25461,743
 54  A*02:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 55  A*24:02-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*02:01  Mexico Chiapas Lacandon Mayans 0.2294218
 56  A*24:02-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 57  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:01  Mexico Chiapas Lacandon Mayans 0.2294218
 58  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 59  A*31:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 60  A*31:01-B*40:02-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:01  Mexico Chiapas Lacandon Mayans 0.2294218
 61  A*31:01-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*105:01  Mexico Chiapas Lacandon Mayans 0.2294218
 62  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 63  A*31:01-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 64  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 65  A*68:01-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:01  Mexico Chiapas Lacandon Mayans 0.2294218
 66  A*68:01-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*105:01  Mexico Chiapas Lacandon Mayans 0.2294218
 67  A*68:01-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 68  A*68:05-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 69  A*02:06-B*40:02-C*03:05-DRB1*04:02-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 70  A*02:06-B*40:27-C*03:05-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPB1*04:01  Nicaragua Managua 0.2165339
 71  A*02:33-B*40:27-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPB1*04:01  Nicaragua Managua 0.2165339
 72  A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:01  Nicaragua Managua 0.2165339
 73  A*24:02-B*40:02-C*03:04-DRB1*04:05-DQA1*03:01-DQB1*03:02-DPB1*04:01  Nicaragua Managua 0.2165339
 74  A*24:02-B*40:02-C*03:05-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*05:01  Nicaragua Managua 0.2165339
 75  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*14:01  Nicaragua Managua 0.2165339
 76  A*24:02-B*40:08-C*03:04-DRB1*04:02-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 77  A*31:01-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 78  A*31:01-B*40:02-C*03:06-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPB1*05:01  Nicaragua Managua 0.2165339
 79  A*31:01-B*40:02-C*03:06-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 80  A*31:01-B*40:08-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 81  A*31:01-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 82  A*31:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 83  A*68:01-B*40:02-C*03:05-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 84  A*68:03-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 85  A*68:03-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 86  A*68:03-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 87  A*24-B*40-C*03-DRB1*04-DQA1*03-DQB1*03  Spain, Castilla y Leon, Northwest, 0.19441,743
 88  A*26:01-B*40:01-C*03:04-DRB1*04:01-DQA1*03:01-DQB1*03:02-DPB1*04:01  Sri Lanka Colombo 0.0700714
 89  A*68-B*40-C*03-DRB1*04-DQA1*03-DQB1*03  Spain, Castilla y Leon, Northwest, 0.06571,743
 90  A*29-B*40-C*03-DRB1*04-DQA1*03-DQB1*03  Spain, Castilla y Leon, Northwest, 0.03621,743
 91  A*01-B*40-C*03-DRB1*04-DQA1*03-DQB1*03  Spain, Castilla y Leon, Northwest, 0.03281,743
 92  A*02:06-B*40:01-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 93  A*02:06-B*40:02-C*03:03-DRB1*04:06-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 94  A*02:06-B*40:02-C*03:04-DRB1*04:10-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 95  A*11:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 96  A*24:02-B*40:02-C*03:04-DRB1*04:01-DQA1*03:03-DQB1*03:01-DPA1*01:03-DPB1*04:01  Japan pop 17 0.03003,078
 97  A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 98  A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01  Japan pop 17 0.03003,078
 99  A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*02:01  Japan pop 17 0.03003,078
 100  A*24:02-B*40:02-C*03:04-DRB1*04:05-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 112) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
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