Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 100 (from 125) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*24:02-B*54:01-C*01:02-DRB1*04:05-DRB4*01:01-DQB1*04:01  USA NMDP Japanese 2.592824,582
 2  A*24:02-B*54:01-C*01:02-DRB1*04:05  Japan pop 16 2.539018,604
 3  B*54:01-C*01:02-DRB1*04:05  South Korea pop 3 2.5000485
 4  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 1.99003,078
 5  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQB1*04:01-DPB1*05:01  Japan Central 1.3000371
 6  A*24:02-B*54:01-C*01:02-DRB1*04:05-DRB4*01:01-DQB1*04:01  USA NMDP Korean 1.191177,584
 7  A*11:01-B*54:01-C*01:02-DRB1*04:05-DRB4*01:01-DQB1*04:01  USA NMDP Japanese 1.032524,582
 8  A*11:01-B*54:01-C*01:02-DRB1*04:05  Japan pop 16 1.001018,604
 9  A*24:02:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DQB1*04:01:01  China Zhejiang Han 0.79201,734
 10  A*11:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.65003,078
 11  A*11:01-B*54:01-C*01:02-DRB1*04:05-DQB1*04:01  USA Asian pop 2 0.63301,772
 12  A*11:01-B*54:01-C*01:02-DRB1*04:05-DRB4*01:01-DQB1*04:01  USA NMDP Vietnamese 0.546343,540
 13  A*24:02-B*54:01-C*01:02-DRB1*04:05  Germany DKMS - China minority 0.52301,282
 14  A*24:02-B*54:01-C*01:02-DRB1*04:05-DRB4*01:01-DQB1*04:01  USA NMDP Chinese 0.475199,672
 15  A*11:01-B*54:01-C*01:02-DRB1*04:05-DRB4*01:01-DQB1*04:01  USA NMDP Korean 0.438577,584
 16  A*11:01-B*54:01-C*01:02-DRB1*04:05  Germany DKMS - China minority 0.40601,282
 17  A*11:01:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DQB1*04:01:01  China Zhejiang Han 0.40431,734
 18  A*24:02-B*54:01-C*01:02-DRB1*04:05  Hong Kong Chinese BMDR 0.37737,595
 19  A*11:01-B*54:01-C*01:02-DRB1*04:05-DRB4*01:01-DQB1*04:01  USA NMDP Chinese 0.369099,672
 20  A*24:02-B*54:01-C*01:02-DRB1*04:05-DRB4*01:01-DQB1*04:01  USA NMDP Vietnamese 0.365143,540
 21  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQB1*04:01  USA Asian pop 2 0.36301,772
 22  A*02:01-B*54:01-C*01:02-DRB1*04:05  Japan pop 16 0.360018,604
 23  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.29003,078
 24  A*11:01-B*54:01-C*01:02-DRB1*04:05  Hong Kong Chinese BMDR 0.28717,595
 25  A*02:06-B*54:01-C*01:02-DRB1*04:05-DQA1*03:01-DQB1*04:01-DPB1*05:01  USA San Diego 0.2600496
 26  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQA1*01:03-DQB1*04:01-DPB1*05:01  USA San Diego 0.2600496
 27  A*02:68-B*54:01-C*01:02-DRB1*04:05-DQB1*06:01  Malaysia Peninsular Chinese 0.2577194
 28  A*11:01-B*54:01-C*01:02-DRB1*04:05-DQB1*04:01  Malaysia Peninsular Chinese 0.2577194
 29  A*24:02:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.23725,266
 30  A*02:01-B*54:01-C*01:02-DRB1*04:05-DQB1*04:01  USA Asian pop 2 0.22601,772
 31  A*02:06-B*54:01-C*01:02-DRB1*04:05  Japan pop 16 0.219018,604
 32  A*26:01-B*54:01-C*01:02-DRB1*04:05  Japan pop 16 0.188018,604
 33  A*11:01:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.16755,266
 34  A*02:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.16003,078
 35  A*02:01-B*54:01-C*01:02-DRB1*04:05  Hong Kong Chinese BMDR 0.15947,595
 36  A*31:01-B*54:01-C*01:02-DRB1*04:05  Japan pop 16 0.141018,604
 37  A*02:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.13003,078
 38  A*11:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.13003,078
 39  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*19:01  Japan pop 17 0.13003,078
 40  A*02:06-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.10003,078
 41  A*26:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.10003,078
 42  A*26:03-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.10003,078
 43  A*31:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.10003,078
 44  A*24:02-B*54:01-C*01:02-DRB1*04:05-DRB4*01:01-DQB1*04:01  USA NMDP Filipino 0.091750,614
 45  A*02:01:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.09055,266
 46  A*02:07:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.07925,266
 47  A*11:01-B*54:01-C*01:02-DRB1*04:05-DRB4*01:01-DQB1*04:01  USA NMDP Southeast Asian 0.075827,978
 48  A*24:02-B*54:01-C*01:02-DRB1*04:05-DRB4*01:01-DQB1*04:01  USA NMDP Southeast Asian 0.070627,978
 49  A*02:06-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 50  A*11:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*02:01  Japan pop 17 0.07003,078
 51  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*04:01  Japan pop 17 0.07003,078
 52  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*04:02  Japan pop 17 0.07003,078
 53  A*26:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.07003,078
 54  A*33:03:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DQB1*04:01:01  China Zhejiang Han 0.05771,734
 55  A*11:01-B*54:01-C*01:02-DRB1*04:05-DRB4*01:01-DQB1*04:01  USA NMDP Filipino 0.055750,614
 56  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQB1*04:01  Malaysia Peninsular Malay 0.0526951
 57  A*31:01:02-B*54:01:01-C*01:02:01-DRB1*04:05:01-DQB1*04:01:01  China Zhejiang Han 0.05201,734
 58  A*24:02:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DPB1*13:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.04955,266
 59  A*02:06-B*54:01-C*01:02-DRB1*04:05  Hong Kong Chinese BMDR 0.04887,595
 60  A*26:03-B*54:01-C*01:02-DRB1*04:05  Japan pop 16 0.047018,604
 61  A*24:02:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DPB1*03:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.04545,266
 62  A*02:01-B*54:01-C*01:02-DRB1*04:05  Germany DKMS - China minority 0.04401,282
 63  A*02:06-B*54:01-C*01:02-DRB1*04:05-DQB1*04:01  USA Asian pop 2 0.04401,772
 64  A*02:07-B*54:01-C*01:02-DRB1*04:05-DQB1*03:03  USA Asian pop 2 0.04401,772
 65  A*26:02-B*54:01-C*01:02-DRB1*04:05-DQB1*04:01  USA Asian pop 2 0.04401,772
 66  A*02:06-B*54:01-C*01:02-DRB1*04:05-DQB1*03:03  Germany DKMS - Turkey minority 0.04104,856
 67  A*11:02-B*54:01-C*01:02-DRB1*04:05  Hong Kong Chinese BMDR 0.04047,595
 68  A*11:01:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.03985,266
 69  A*02:01:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DQB1*04:01:01  China Zhejiang Han 0.03901,734
 70  A*33:03-B*54:01-C*01:02-DRB1*04:05  Japan pop 16 0.037018,604
 71  A*02:03:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.03605,266
 72  A*24:02:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DPB1*135:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.03085,266
 73  A*11:01:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DQB1*03:01:01  China Zhejiang Han 0.03071,734
 74  A*02:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:01-DPB1*09:01  Japan pop 17 0.03003,078
 75  A*02:06-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*02:02  Japan pop 17 0.03003,078
 76  A*02:07-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 77  A*11:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:01-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 78  A*11:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 79  A*11:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:01-DPB1*14:01  Japan pop 17 0.03003,078
 80  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQA1*03:01-DQB1*04:01-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 81  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQA1*03:01-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 82  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 83  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*02:02  Japan pop 17 0.03003,078
 84  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:01-DPB1*09:01  Japan pop 17 0.03003,078
 85  A*24:02-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 86  A*24:20-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 87  A*24:20-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 88  A*31:01-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:01-DPB1*09:01  Japan pop 17 0.03003,078
 89  A*33:03-B*54:01-C*01:02-DRB1*04:05-DQA1*03:03-DQB1*04:01-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 90  A*02:07:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DQB1*04:01:01  China Zhejiang Han 0.02951,734
 91  A*02:03:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DQB1*04:01:01  China Zhejiang Han 0.02881,734
 92  A*02:06:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DQB1*02:01:01  China Zhejiang Han 0.02881,734
 93  A*24:02:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DPB1*04:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02865,266
 94  A*24:02:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DQB1*03:01:01  China Zhejiang Han 0.02711,734
 95  A*02:03-B*54:01-C*01:02-DRB1*04:05  Hong Kong Chinese BMDR 0.02687,595
 96  A*24:02:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DPB1*38:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02625,266
 97  A*02:07-B*54:01-C*01:02-DRB1*04:05  Japan pop 16 0.026018,604
 98  A*24:20-B*54:01-C*01:02-DRB1*04:05  Japan pop 16 0.026018,604
 99  A*31:01-B*54:01-C*01:02-DRB1*04:05  Hong Kong Chinese BMDR 0.02607,595
 100  A*33:03:01-B*54:01:01-C*01:02:01-DRB1*04:05:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02515,266

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 125) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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