Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 92 (from 92) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  B*40:06-C*08:01-DRB1*09:01  South Korea pop 3 1.9000485
 2  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  South Korea pop 3 1.0000485
 3  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03-DPB1*05:01  Japan Central 1.0000371
 4  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Japanese 0.859024,582
 5  A*24:02-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.709018,604
 6  A*24:02:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.69911,734
 7  A*26:02-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.542018,604
 8  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Korean 0.470077,584
 9  A*02:06-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.464018,604
 10  A*24:02-B*40:06-C*08:01-DRB1*09:01  Germany DKMS - China minority 0.46001,282
 11  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.39003,078
 12  A*02:06-B*40:06-C*08:01-DRB1*09:01  Germany DKMS - China minority 0.36601,282
 13  A*26:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.36003,078
 14  A*02:01-B*40:06-C*08:01-DRB1*09:01  Germany DKMS - China minority 0.27301,282
 15  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  Malaysia Peninsular Chinese 0.2577194
 16  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.23003,078
 17  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Chinese 0.214399,672
 18  A*02:01-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.214018,604
 19  A*11:01-B*40:06-C*08:01-DRB1*09:01  Germany DKMS - China minority 0.19801,282
 20  A*11:01:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.18821,734
 21  A*02:01:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.18301,734
 22  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.17801,772
 23  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.16003,078
 24  A*26:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.16003,078
 25  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.15701,772
 26  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Vietnamese 0.141743,540
 27  A*11:01-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.14101,772
 28  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.13003,078
 29  A*31:01-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.115018,604
 30  A*02:01-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.11401,772
 31  A*24:02-B*40:06-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.10327,595
 32  A*02:06:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.09611,734
 33  A*11:01-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.083018,604
 34  A*02:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 35  A*02:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.07003,078
 36  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQA1*03:01-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 37  A*11:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.07003,078
 38  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*04:02  Japan pop 17 0.07003,078
 39  A*26:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.07003,078
 40  A*26:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*19:01  Japan pop 17 0.07003,078
 41  A*31:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.07003,078
 42  A*33:03-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 43  A*02:01-B*40:06-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.06987,595
 44  A*26:01-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.063018,604
 45  A*33:03-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.06301,772
 46  A*11:01-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  Malaysia Peninsular Malay 0.0526951
 47  A*02:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:01-DQB1*05:03-DPA1*01:03-DPB1*04:01  United Arab Emirates Pop 1 0.0467570
 48  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQA1*05:01-DQB1*03:01-DPA1*01:03-DPB1*02:01  United Arab Emirates Pop 1 0.0467570
 49  A*11:01-B*40:06-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.04557,595
 50  A*24:02:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.04415,266
 51  A*30:01-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  USA Asian pop 2 0.04401,772
 52  A*24:02:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.04075,266
 53  A*31:01-B*40:06-C*08:01-DRB1*09:01  Germany DKMS - China minority 0.04001,282
 54  A*02:06:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.03815,266
 55  A*02:06-B*40:06-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.03607,595
 56  A*02:10-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.031018,604
 57  A*31:01:02-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.03041,734
 58  A*02:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 59  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*02:01  Japan pop 17 0.03003,078
 60  A*02:10-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 61  A*11:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 62  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*01:01-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 63  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:01-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 64  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*05:01  Japan pop 17 0.03003,078
 65  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*02:01  Japan pop 17 0.03003,078
 66  A*26:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:01-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 67  A*26:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*03:01  Japan pop 17 0.03003,078
 68  A*26:02-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*04:02  Japan pop 17 0.03003,078
 69  A*31:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 70  A*31:01-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*01:03-DPB1*05:01  Japan pop 17 0.03003,078
 71  A*33:03-B*40:06-C*08:01-DRB1*09:01-DQA1*03:02-DQB1*03:03-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 72  A*24:02:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:01:01  China Zhejiang Han 0.02881,734
 73  A*26:01:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DQB1*03:03:02  China Zhejiang Han 0.02881,734
 74  A*31:01-B*40:06-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.02227,595
 75  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  India East UCBB 0.02082,403
 76  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Filipino 0.018050,614
 77  A*02:06:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DPB1*02:01:02  Hong Kong Chinese HKBMDR HLA 11 loci 0.01645,266
 78  A*02:07-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.016018,604
 79  A*26:01-B*40:06-C*08:01-DRB1*09:01  Hong Kong Chinese BMDR 0.01447,595
 80  A*02:06-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  India Central UCBB 0.01194,204
 81  A*24:20-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.010018,604
 82  A*33:03-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.010018,604
 83  A*02:01-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  India West UCBB 0.00865,829
 84  A*11:01:01-B*40:06:01-C*08:01:01-DRB1*09:01:02-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00855,266
 85  A*24:02-B*40:06-C*08:01-DRB1*09:01-DQB1*03:03  India North UCBB 0.00855,849
 86  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Southeast Asian 0.006727,978
 87  A*01:01-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.005018,604
 88  A*24:46-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.005018,604
 89  A*26:03-B*40:06-C*08:01-DRB1*09:01  Japan pop 16 0.005018,604
 90  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP North American Amerindian 0.001435,791
 91  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP Hispanic South or Central American 0.0008220146,714
 92  A*24:02-B*40:06-C*08:01-DRB1*09:01-DRB4*01:01-DQB1*03:03  USA NMDP European Caucasian 0.00018831,242,890

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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