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Home	Populations	HLA	KIR	Other polymorphisms	HLA-ADR	KDDB

KIR » Linkage disequilibrium in KIR genes

KIR gene organisation

The figures shown below present a summary of relationships between KIR genes, which are organised by centromeric (blue) and telomeric (pink) content. The aim of these figure is to describe the strongest linkage (values from 0-100%) among the different KIR genes. Gene association values are estimated usin the genotype list which is available on the website.

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Population:

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Total individuals analysed: 25118

Overall linkage


Centromeric							Telomeric

3DL3	46	90	47	53	28	96	97	98	100	93	40	36	41	92	100
	2DS2	37	96	68	72	43	43	45	46	44	56	58	58	45	46
		2DL3	38	47	26	92	91	90	90	86	41	36	41	85	90
			2DL2	69	72	44	44	46	47	45	56	59	58	46	47
				2DL5	72	53	52	52	53	47	81	79	83	47	53
					2DS3	30	29	28	28	28	66	56	63	30	28
						2DL1	97	95	96	91	40	36	41	90	96
							2DP1	97	97	91	39	35	40	90	97
								3DP1	98	92	39	35	40	91	98
									2DL4	93	40	36	41	92	100
										3DL1	34	31	35	96	93
											3DS1	83	91	34	40
												2DS5	86	31	36
													2DS1	36	41
														2DS4	92
															3DL2

Both genes positive


Centromeric							Telomeric
3DL3	46	90	47	53	28	96	97	98	100	93	40	36	41	92	100
	2DS2	37	44	34	23	43	43	45	46	42	21	20	23	41	46
		2DL3	38	45	22	89	89	89	90	85	35	31	36	83	90
			2DL2	35	23	44	44	46	47	43	21	21	23	42	47
				2DL5	27	51	51	52	53	47	37	34	39	46	53
					2DS3	27	27	28	28	25	17	10	16	25	28
						2DL1	95	95	96	90	38	34	39	89	96
							2DP1	96	97	91	38	34	39	90	97
								3DP1	98	92	39	35	40	91	98
									2DL4	93	40	36	41	92	100
										3DL1	34	30	35	91	93
											3DS1	29	36	33	40
												2DS5	32	30	36
													2DS1	34	41
														2DS4	92
															3DL2

Both genes negative


Centromeric							Telomeric
3DL3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
	2DS2	1	51	35	49	1	0	0	0	2	35	38	36	3	0
		2DL3	0	2	4	3	2	0	0	1	5	5	5	2	0
			2DL2	34	48	1	0	0	0	2	34	38	35	3	0
				2DL5	45	1	1	0	0	0	44	45	44	1	0
					2DS3	3	2	0	0	3	49	46	47	5	0
						2DL1	2	0	0	1	2	2	2	1	0
							2DP1	0	0	0	1	1	1	1	0
								3DP1	0	0	0	0	0	0	0
									2DL4	0	0	0	0	0	0
										3DL1	0	1	0	6	0
											3DS1	54	55	1	0
												2DS5	55	2	0
													2DS1	1	0
														2DS4	0
															3DL2

©2024 Allele Frequencies Website.

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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