Allele Frequencies in World Populations

HLA Epitopes» Epitope Frequency Search » ABC

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Notes:

¹ Epitope frequencies were calculated using raw genotyping data.
² Epitope frequencies were calculated using haplotype frequencies.


Line Population AA Position Loci Epitope Epitope
Frequency
(in_decimals)
Sample
Size
Location
1Azores Central Islands179, 82, 83A, B82LR0.86005638_0_N_28_0_W
2Azores Oriental Islands179, 82, 83A, B82LR0.85003936_58_N_25_6_W
3Cape Verde Northwestern Islands179, 82, 83A, B82LR0.81006216_0_N_24_0_W
4Cape Verde Southeastern Islands179, 82, 83A, B82LR0.76006216_0_N_24_0_W
5England North West179, 82, 83A, B82LR0.700029853_0_N_3_0_W
6Ghana Ga-Adangbe179, 82, 83A, B82LR0.79001315_45_N_0_12_E
7Guinea Bissau179, 82, 83A, B82LR0.72006512_0_N_15_0_W
8Ireland Northern179, 82, 83A, B82LR0.68001,00054_40_N_6_45_W
9Ireland South179, 82, 83A, B82LR0.720025053_20_N_6_15_W
10Madeira179, 82, 83A, B82LR0.830018532_44_N_16_58_W
11Mexico City Mestizo pop 2279, 82, 83A, B82LR23419_26_N_99_8_W
12Mexico Oaxaca Mixe279, 82, 83A, B82LR5517_5_N_96_45_W
13Mexico Oaxaca Mixtec279, 82, 83A, B82LR10317_5_N_96_45_W
14Philippines Ivatan279, 82, 83A, B82LR5020_22_N_121_56_E
15Poland DKMS279, 82, 83A, B82LR0.770020,65352_8_N_19_23_E
16Portugal Center179, 82, 83A, B82LR0.74005039_0_N_8_0_W
17Portugal North179, 82, 83A, B82LR0.83004641_0_N_8_0_W
18Portugal South179, 82, 83A, B82LR0.76004937_0_N_8_0_W
19Sao Tome Island Angolar179, 82, 83A, B82LR0.9200120_20_N_6_44_E
20Sao Tome Island Forro179, 82, 83A, B82LR0.9400500_20_N_6_44_E
21Saudi Arabia pop 5179, 82, 83A, B82LR0.800015824_38_N_46_43_E
22Taiwan Ami279, 82, 83A, B82LR9823_0_N_121_0_E
23Taiwan Bunun279, 82, 83A, B82LR10123_46_N_121_0_E
24Taiwan Puyuma279, 82, 83A, B82LR0.91005023_0_N_121_0_E
25Taiwan Rukai279, 82, 83A, B82LR0.95005023_0_N_121_0_E
26Taiwan Tao279, 82, 83A, B82LR0.86005024_0_N_121_0_E
27Taiwan Thao279, 82, 83A, B82LR0.88003024_0_N_121_0_E
28USA African American pop 4279, 82, 83A, B82LR0.77002,41144_58_N_93_15_W
29USA African American pop 4279, 82, 83A, B82LR0.78002,41144_58_N_93_15_W
30USA Asian pop 2279, 82, 83A, B82LR0.78001,77244_58_N_93_15_W
31USA Asian pop 2279, 82, 83A, B82LR0.80001,77244_58_N_93_15_W
32USA Hispanic pop 2279, 82, 83A, B82LR0.75001,99944_58_N_93_15_W
33USA Hispanic pop 2279, 82, 83A, B82LR0.74001,99944_58_N_93_15_W



   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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