Allele Frequencies in World Populations

HLA Epitopes» Epitope Frequency Search » ABC

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Notes:

¹ Epitope frequencies were calculated using raw genotyping data.
² Epitope frequencies were calculated using haplotype frequencies.


Line Population AA Position Loci Epitope Epitope
Frequency
(in_decimals)
Sample
Size
Location
1Azores Central Islands170, 73A70HT0.89005638_0_N_28_0_W
2Azores Oriental Islands170, 73A70HT0.90003936_58_N_25_6_W
3Cape Verde Northwestern Islands170, 73A70HT0.82006216_0_N_24_0_W
4Cape Verde Southeastern Islands170, 73A70HT0.92006216_0_N_24_0_W
5England North West170, 73A70HT0.890029853_0_N_3_0_W
6Ghana Ga-Adangbe170, 73A70HT0.82001315_45_N_0_12_E
7Guinea Bissau170, 73A70HT0.86006512_0_N_15_0_W
8Ireland Northern170, 73A70HT0.86001,00054_40_N_6_45_W
9Ireland South170, 73A70HT0.880025053_20_N_6_15_W
10Madeira170, 73A70HT0.910018532_44_N_16_58_W
11Mexico City Mestizo pop 2270, 73A70HT23419_26_N_99_8_W
12Mexico Oaxaca Mixe270, 73A70HT5517_5_N_96_45_W
13Mexico Oaxaca Mixtec270, 73A70HT10317_5_N_96_45_W
14Philippines Ivatan270, 73A70HT0.89005020_22_N_121_56_E
15Poland DKMS270, 73A70HT0.900020,65352_8_N_19_23_E
16Portugal Center170, 73A70HT0.88005039_0_N_8_0_W
17Portugal North170, 73A70HT0.83004641_0_N_8_0_W
18Portugal South170, 73A70HT0.84004937_0_N_8_0_W
19Sao Tome Island Angolar170, 73A70HT0.6700120_20_N_6_44_E
20Sao Tome Island Forro170, 73A70HT0.7600500_20_N_6_44_E
21Saudi Arabia pop 5170, 73A70HT0.850015824_38_N_46_43_E
22Taiwan Ami270, 73A70HT9823_0_N_121_0_E
23Taiwan Bunun270, 73A70HT10123_46_N_121_0_E
24Taiwan Puyuma270, 73A70HT0.98005023_0_N_121_0_E
25Taiwan Rukai270, 73A70HT1.00005023_0_N_121_0_E
26Taiwan Tao270, 73A70HT0.81005024_0_N_121_0_E
27Taiwan Thao270, 73A70HT0.93003024_0_N_121_0_E
28USA African American pop 4270, 73A70HT0.81002,41144_58_N_93_15_W
29USA Asian pop 2270, 73A70HT0.79001,77244_58_N_93_15_W
30USA Hispanic pop 2270, 73A70HT0.87001,99944_58_N_93_15_W



   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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