Allele Frequencies in World Populations

HLA Epitopes» Epitope Frequency Search » ABC

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Notes:

¹ Epitope frequencies were calculated using raw genotyping data.
² Epitope frequencies were calculated using haplotype frequencies.


Line Population AA Position Loci Epitope Epitope
Frequency
(in_decimals)
Sample
Size
Location
1Azores Central Islands169, 70, 71, 73B, C69RA5638_0_N_28_0_W
2Azores Oriental Islands169, 70, 71, 73B, C69RA3936_58_N_25_6_W
3Cape Verde Northwestern Islands169, 70, 71, 73B, C69RA6216_0_N_24_0_W
4Cape Verde Southeastern Islands169, 70, 71, 73B, C69RA6216_0_N_24_0_W
5England North West169, 70, 71, 73B, C69RA0.810029853_0_N_3_0_W
6Ghana Ga-Adangbe169, 70, 71, 73B, C69RA0.79001315_45_N_0_12_E
7Guinea Bissau169, 70, 71, 73B, C69RA6512_0_N_15_0_W
8Ireland Northern169, 70, 71, 73B, C69RA0.64001,00054_40_N_6_45_W
9Ireland South169, 70, 71, 73B, C69RA0.890025053_20_N_6_15_W
10Madeira169, 70, 71, 73B, C69RA18532_44_N_16_58_W
11Mexico City Mestizo pop 2269, 70, 71, 73B, C69RA0.790023419_26_N_99_8_W
12Mexico Oaxaca Mixe269, 70, 71, 73B, C69RA0.87005517_5_N_96_45_W
13Mexico Oaxaca Mixtec269, 70, 71, 73B, C69RA0.810010317_5_N_96_45_W
14Philippines Ivatan269, 70, 71, 73B, C69RA0.70005020_22_N_121_56_E
15Poland DKMS269, 70, 71, 73B, C69RA0.890020,65352_8_N_19_23_E
16Portugal Center169, 70, 71, 73B, C69RA5039_0_N_8_0_W
17Portugal North169, 70, 71, 73B, C69RA4641_0_N_8_0_W
18Portugal South169, 70, 71, 73B, C69RA4937_0_N_8_0_W
19Sao Tome Island Angolar169, 70, 71, 73B, C69RA120_20_N_6_44_E
20Sao Tome Island Forro169, 70, 71, 73B, C69RA500_20_N_6_44_E
21Saudi Arabia pop 5169, 70, 71, 73B, C69RA0.830015824_38_N_46_43_E
22Taiwan Ami269, 70, 71, 73B, C69RA0.57009823_0_N_121_0_E
23Taiwan Bunun269, 70, 71, 73B, C69RA0.590010123_46_N_121_0_E
24Taiwan Puyuma269, 70, 71, 73B, C69RA0.55005023_0_N_121_0_E
25Taiwan Rukai269, 70, 71, 73B, C69RA0.44005023_0_N_121_0_E
26Taiwan Tao269, 70, 71, 73B, C69RA0.80005024_0_N_121_0_E
27Taiwan Thao269, 70, 71, 73B, C69RA0.56003024_0_N_121_0_E
28USA African American pop 4269, 70, 71, 73B, C69RA0.85002,41144_58_N_93_15_W
29USA Asian pop 2269, 70, 71, 73B, C69RA0.67001,77244_58_N_93_15_W
30USA Asian pop 2269, 70, 71, 73B, C69RA0.68001,77244_58_N_93_15_W
31USA Hispanic pop 2269, 70, 71, 73B, C69RA0.79001,99944_58_N_93_15_W
32USA Hispanic pop 2269, 70, 71, 73B, C69RA0.78001,99944_58_N_93_15_W



   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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