Allele Frequencies in World Populations

HLA Epitopes» Epitope Frequency Search » ABC

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Notes:

¹ Epitope frequencies were calculated using raw genotyping data.
² Epitope frequencies were calculated using haplotype frequencies.


Line Population AA Position Loci Epitope Epitope
Frequency
(in_decimals)
Sample
Size
Location
1Azores Central Islands141B, C41T5638_0_N_28_0_W
2Azores Oriental Islands141B, C41T3936_58_N_25_6_W
3Cape Verde Northwestern Islands141B, C41T6216_0_N_24_0_W
4Cape Verde Southeastern Islands141B, C41T6216_0_N_24_0_W
5England North West141B, C41T0.470029853_0_N_3_0_W
6Ghana Ga-Adangbe141B, C41T0.30001315_45_N_0_12_E
7Guinea Bissau141B, C41T6512_0_N_15_0_W
8Ireland Northern141B, C41T0.52001,00054_40_N_6_45_W
9Ireland South141B, C41T0.450025053_20_N_6_15_W
10Madeira141B, C41T18532_44_N_16_58_W
11Mexico City Mestizo pop 2241B, C41T0.310023419_26_N_99_8_W
12Mexico Oaxaca Mixe241B, C41T0.22005517_5_N_96_45_W
13Mexico Oaxaca Mixtec241B, C41T0.120010317_5_N_96_45_W
14Philippines Ivatan241B, C41T0.60005020_22_N_121_56_E
15Poland DKMS241B, C41T0.460020,65352_8_N_19_23_E
16Portugal Center141B, C41T5039_0_N_8_0_W
17Portugal North141B, C41T4641_0_N_8_0_W
18Portugal South141B, C41T4937_0_N_8_0_W
19Sao Tome Island Angolar141B, C41T120_20_N_6_44_E
20Sao Tome Island Forro141B, C41T500_20_N_6_44_E
21Saudi Arabia pop 5141B, C41T0.460015824_38_N_46_43_E
22Taiwan Ami241B, C41T0.60009823_0_N_121_0_E
23Taiwan Bunun241B, C41T0.750010123_46_N_121_0_E
24Taiwan Puyuma241B, C41T0.64005023_0_N_121_0_E
25Taiwan Rukai241B, C41T0.84005023_0_N_121_0_E
26Taiwan Tao241B, C41T0.51005024_0_N_121_0_E
27Taiwan Thao241B, C41T0.72003024_0_N_121_0_E
28USA African American pop 4241B, C41T0.37002,41144_58_N_93_15_W
29USA African American pop 4241B, C41T0.36002,41144_58_N_93_15_W
30USA Asian pop 2241B, C41T0.46001,77244_58_N_93_15_W
31USA Asian pop 2241B, C41T0.47001,77244_58_N_93_15_W
32USA Hispanic pop 2241B, C41T0.46001,99944_58_N_93_15_W



   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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