Allele Frequencies in World Populations

HLA Epitopes» Epitope Frequency Search » ABC

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Notes:

¹ Epitope frequencies were calculated using raw genotyping data.
² Epitope frequencies were calculated using haplotype frequencies.


Line Population AA Position Loci Epitope Epitope
Frequency
(in_decimals)
Sample
Size
Location
1Azores Central Islands116C16S5638_0_N_28_0_W
2Azores Oriental Islands116C16S3936_58_N_25_6_W
3Cape Verde Northwestern Islands116C16S6216_0_N_24_0_W
4Cape Verde Southeastern Islands116C16S6216_0_N_24_0_W
5England North West116C16S0.070029853_0_N_3_0_W
6Ghana Ga-Adangbe116C16S0.14001315_45_N_0_12_E
7Guinea Bissau116C16S6512_0_N_15_0_W
8Ireland Northern116C16S0.04001,00054_40_N_6_45_W
9Ireland South116C16S0.070025053_20_N_6_15_W
10Madeira116C16S18532_44_N_16_58_W
11Mexico City Mestizo pop 2216C16S0.030023419_26_N_99_8_W
12Mexico Oaxaca Mixe216C16S0.00005517_5_N_96_45_W
13Mexico Oaxaca Mixtec216C16S0.020010317_5_N_96_45_W
14Philippines Ivatan216C16S0.10005020_22_N_121_56_E
15Poland DKMS216C16S0.150020,65352_8_N_19_23_E
16Portugal Center116C16S5039_0_N_8_0_W
17Portugal North116C16S4641_0_N_8_0_W
18Portugal South116C16S4937_0_N_8_0_W
19Sao Tome Island Angolar116C16S120_20_N_6_44_E
20Sao Tome Island Forro116C16S500_20_N_6_44_E
21Saudi Arabia pop 5116C16S0.060015824_38_N_46_43_E
22Taiwan Ami216C16S0.05009823_0_N_121_0_E
23Taiwan Bunun216C16S0.120010123_46_N_121_0_E
24Taiwan Puyuma216C16S0.23005023_0_N_121_0_E
25Taiwan Rukai216C16S0.14005023_0_N_121_0_E
26Taiwan Tao216C16S0.64005024_0_N_121_0_E
27Taiwan Thao216C16S0.22003024_0_N_121_0_E
28USA African American pop 4216C16S0.16002,41144_58_N_93_15_W
29USA Asian pop 2216C16S0.04001,77244_58_N_93_15_W
30USA Hispanic pop 2216C16S0.08001,99944_58_N_93_15_W



   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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