Allele Frequencies in World Populations

HLA Epitopes» Epitope Frequency Search » ABC

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Notes:

¹ Epitope frequencies were calculated using raw genotyping data.
² Epitope frequencies were calculated using haplotype frequencies.


Line Population AA Position Loci Epitope Epitope
Frequency
(in_decimals)
Sample
Size
Location
1Azores Central Islands1147B, C147L5638_0_N_28_0_W
2Azores Oriental Islands1147B, C147L3936_58_N_25_6_W
3Cape Verde Northwestern Islands1147B, C147L6216_0_N_24_0_W
4Cape Verde Southeastern Islands1147B, C147L6216_0_N_24_0_W
5England North West1147B, C147L0.650029853_0_N_3_0_W
6Ghana Ga-Adangbe1147B, C147L0.41001315_45_N_0_12_E
7Guinea Bissau1147B, C147L6512_0_N_15_0_W
8Ireland Northern1147B, C147L0.45001,00054_40_N_6_45_W
9Ireland South1147B, C147L0.720025053_20_N_6_15_W
10Madeira1147B, C147L18532_44_N_16_58_W
11Mexico City Mestizo pop 22147B, C147L0.520023419_26_N_99_8_W
12Mexico Oaxaca Mixe2147B, C147L0.47005517_5_N_96_45_W
13Mexico Oaxaca Mixtec2147B, C147L0.550010317_5_N_96_45_W
14Philippines Ivatan2147B, C147L0.71005020_22_N_121_56_E
15Poland DKMS2147B, C147L0.560020,65352_8_N_19_23_E
16Portugal Center1147B, C147L5039_0_N_8_0_W
17Portugal North1147B, C147L4641_0_N_8_0_W
18Portugal South1147B, C147L4937_0_N_8_0_W
19Sao Tome Island Angolar1147B, C147L120_20_N_6_44_E
20Sao Tome Island Forro1147B, C147L500_20_N_6_44_E
21Saudi Arabia pop 51147B, C147L0.390015824_38_N_46_43_E
22Taiwan Ami2147B, C147L0.90009823_0_N_121_0_E
23Taiwan Bunun2147B, C147L0.700010123_46_N_121_0_E
24Taiwan Puyuma2147B, C147L0.62005023_0_N_121_0_E
25Taiwan Rukai2147B, C147L0.65005023_0_N_121_0_E
26Taiwan Tao2147B, C147L0.33005024_0_N_121_0_E
27Taiwan Thao2147B, C147L0.73003024_0_N_121_0_E
28USA African American pop 42147B, C147L0.54002,41144_58_N_93_15_W
29USA African American pop 42147B, C147L0.53002,41144_58_N_93_15_W
30USA Asian pop 22147B, C147L0.48001,77244_58_N_93_15_W
31USA Asian pop 22147B, C147L0.47001,77244_58_N_93_15_W
32USA Hispanic pop 22147B, C147L0.50001,99944_58_N_93_15_W
33USA Hispanic pop 22147B, C147L0.49001,99944_58_N_93_15_W



   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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