Allele Frequencies in World Populations

HLA > Allele Frequency Search > Classical

Please specify your search by selecting options from boxes. Then, click "Search" to find HLA allele frequencies that match your criteria. Remember at least one option must be selected.
Locus:  Starting Allele:  Ending Allele:  �� (Type your allele e.g. A*01:01, etc. or leave both empty to include all alleles)
Select specific alleles (If you want to pick specific alleles, make sure your alleles are within the Start-End range above)
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Select specific populations
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Population:      Country:      Source of dataset: 
Region:  Ethnic Origin:     Type of Study:  Sort by: 
Sample Size:      Sample Year:      Level of resolution :   (Click here for further details)
Population standard: Gold only Gold and Silver All Show frequencies: All Only positives Only negatives
   

Note: The aim of this search option is to display frequencies organised by population. If your selected criteria retrieves alleles that have been found in more than one hundred populations the number of columns will be limited. For a best view please reduce the number of populations to compare.


Line Allele
Colombia North Chimila Amerindians (n=47)
Costa Rica Amerindians (G) (n=125)
Ecuador Amerindians (n=63)
India Andhra Pradesh Telugu Speaking (n=186)
India Delhi pop 2 (n=90)
India Jalpaiguri Toto (n=40)
India Karnataka Kannada Speaking (n=174)
India Kerala Hindu Ezhava (n=24)
India Kerala Hindu Nair (n=41)
India Kerala Hindu Namboothiri (n=40)
India Kerala Hindu Pulaya (n=16)
India Kerala Malabar Muslim (n=34)
India Kerala Malayalam speaking (n=356)
India Kerala Syrian Christian (n=31)
India Khandesh Region Pawra (n=50)
India Mumbai Maratha (n=91)
India New Delhi (n=71)
India North Gujarat (n=338)
India North pop 2 (n=72)
India North pop 3 (n=587)
India sub-Himalayan West Bengal Kami (n=158)
India Tamil Nadu (n=2492)
India UCBB_Central Indian HLA (n=4204)
India West Bhil (n=50)
India West Coast Parsi (n=50)
Malaysia Peninsular Indian (n=271)
Singapore SGVP. Indian INS (n=86)
USA NMDP American Indian South or Central America (n=5926)
USA NMDP Caribean Indian (n=14339)
USA NMDP North American Amerindian (n=35791)
USA NMDP South Asian Indian (n=185391)
 Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
Allele
Freq
1A*290.0000.0240.0000.0000.0000.0000.0280.0080.016
2A*29:010.007940.0110.0000.0000.0150.0190.007830.009040.0000.0200.007380.0020.0010.001730.013
3A*29:01:010.005380.0260.020
4A*29:020.0430.0400.0270.0000.0000.000400.001550.0000.0200.0000.0310.0560.0270.00129
5A*29:02:010.0360.001
6A*29:030.000030.00001
7A*29:090.00000
8A*29:100.00001
9A*29:120.00003
Totals0.0430.0360.0480.0050.0380.0000.0260.0000.0240.0000.0000.0000.0210.0000.0000.0000.0150.0280.0190.0080.0160.0080.0110.0000.0400.0070.0000.0330.0570.0290.014
Number of Alleles (k)1121201111112122111112222112245
Heterozygosity (h)1.00891.00271.00631.00271.00471.01271.00221.02131.01181.01271.03231.01491.00101.01641.01011.00551.00691.00071.00661.00081.00291.00011.00001.01011.00931.00181.00580.99910.99690.99930.9998
   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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