Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 82 (from 82) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*24:03-B*51:06-C*12:04-DRB1*07:01-DRB4*01:01-DQB1*03:03  USA NMDP Filipino 1.299850,614
 2  A*24:03-B*51:06-C*12:04-DRB1*12:02-DQB1*03:01  USA NMDP Hawaiian or other Pacific Islander 0.408411,499
 3  A*33:03:01-B*39:01:01-C*12:04:02-DRB1*07:01:01-DQB1*02:02:01  India Karnataka Kannada Speaking 0.2870174
 4  A*24:02:01-B*40:06:04-C*12:04:02-DRB1*14:04:01-DQB1*03:01:01  India Andhra Pradesh Telugu Speaking 0.2688186
 5  A*24:33-B*39:01:01-C*12:04:02-DRB1*03:01:01-DQB1*02:01:01  India Andhra Pradesh Telugu Speaking 0.2688186
 6  A*24:33-B*51:06:01-C*12:04:02-DRB1*04:03:01-DQB1*03:02:01  India Andhra Pradesh Telugu Speaking 0.2688186
 7  A*24:03-B*51:06-C*12:04-DRB1*07:01-DQB1*02:01  USA NMDP Hawaiian or other Pacific Islander 0.255411,499
 8  A*24:03-B*51:06-C*12:04-DRB1*07:01-DQB1*03:03  USA NMDP Hawaiian or other Pacific Islander 0.241111,499
 9  A*11:01-B*39:01-C*12:04-DRB1*14:01-DQB1*06:02  Malaysia Peninsular Indian 0.1845271
 10  A*24:03-B*39:01-C*12:04-DRB1*14:04-DQB1*05:03  Malaysia Peninsular Indian 0.1845271
 11  A*24:03-B*51:06-C*12:04-DRB1*07:01-DQB1*03:03  USA Asian pop 2 0.17801,772
 12  B*51:06-C*12:04  USA Asian pop 2 0.17101,772
 13  A*24:02-B*40:06-C*12:04-DRB1*14:04-DQA1*01:01-DQB1*05:03-DPB1*01:01  Sri Lanka Colombo 0.1401714
 14  A*24:03-B*51:06-C*12:04-DRB1*12:02-DQB1*05:02  USA Asian pop 2 0.08901,772
 15  A*24:02-B*40:06-C*12:04-DRB1*14:04-DQB1*05:03  India Tamil Nadu 0.07502,492
 16  A*02:03-B*39:01-C*12:04-DRB1*04:01-DQA1*01:02-DQB1*06:04-DPB1*04:02  Sri Lanka Colombo 0.0700714
 17  A*02:03-B*39:01-C*12:04-DRB1*09:01-DQA1*03:01-DQB1*03:03-DPB1*04:02  Sri Lanka Colombo 0.0700714
 18  A*32:01-B*39:01-C*12:04-DRB1*01:01-DQA1*01:01-DQB1*03:03-DPB1*02:01  Sri Lanka Colombo 0.0700714
 19  A*33:03-B*15:18-C*12:04-DRB1*14:04-DQA1*01:01-DQB1*05:03-DPB1*02:01  Sri Lanka Colombo 0.0700714
 20  A*11:01-B*39:01-C*12:04-DRB1*15:02-DQB1*05:02  Malaysia Peninsular Malay 0.0526951
 21  A*24:33-B*51:06-C*12:04-DRB1*15:02-DQB1*06:01  India UCBB_Central Indian HLA 0.04854,204
 22  A*24:02-B*51:06-C*12:04-DRB1*12:02-DQB1*03:01  India Tamil Nadu 0.04012,492
 23  A*24:03-B*39:01-C*12:04-DRB1*15:02-DQB1*05:03  India Tamil Nadu 0.04012,492
 24  A*24:33-B*39:01-C*12:04-DRB1*12:02-DQB1*03:01  India UCBB_Central Indian HLA 0.03574,204
 25  A*24:02-B*40:06-C*12:04-DRB1*13:01-DQB1*06:03  India Tamil Nadu 0.02902,492
 26  B*39:01-C*12:04  USA Asian pop 2 0.02801,772
 27  A*24:03-B*51:06-C*12:04-DRB1*15:02-DQB1*06:01  India Tamil Nadu 0.02642,492
 28  A*02:01-B*38:01-C*12:04-DRB1*16:01  Germany DKMS - Croatia minority 0.02402,057
 29  A*01:01-B*39:01-C*12:04-DRB1*07:01-DQB1*03:03  India Tamil Nadu 0.02012,492
 30  A*01:01-B*39:01-C*12:04-DRB1*09:01-DQB1*03:03  India Tamil Nadu 0.02012,492
 31  A*02:06-B*39:01-C*12:04-DRB1*15:91-DQB1*06:01  India Tamil Nadu 0.02012,492
 32  A*02:11-B*39:01-C*12:04-DRB1*04:10-DQB1*04:02  India Tamil Nadu 0.02012,492
 33  A*11:01-B*38:01-C*12:04-DRB1*10:01-DQB1*05:01  India Tamil Nadu 0.02012,492
 34  A*11:01-B*40:06-C*12:04-DRB1*12:02-DQB1*03:01  India Tamil Nadu 0.02012,492
 35  A*24:02-B*39:01-C*12:04-DRB1*14:04-DQB1*05:03  India Tamil Nadu 0.02012,492
 36  A*24:03-B*39:01-C*12:04-DRB1*15:01-DQB1*06:01  India Tamil Nadu 0.02012,492
 37  A*02:01-B*51:06-C*12:04-DRB1*15:02-DQB1*06:01  India UCBB_Central Indian HLA 0.01194,204
 38  A*02:06-B*39:01-C*12:04-DRB1*14:04-DQB1*05:03  India UCBB_Central Indian HLA 0.01194,204
 39  A*24:33-B*39:01-C*12:04-DRB1*15:02-DQB1*05:03  India UCBB_Central Indian HLA 0.01194,204
 40  A*24:33-B*51:06-C*12:04-DRB1*03:01-DQB1*02:01  India UCBB_Central Indian HLA 0.01104,204
 41  A*01:01-B*39:01-C*12:04-DRB1*04:03-DQB1*03:02  India Tamil Nadu 0.00852,492
 42  A*01:01-B*39:01-C*12:04-DRB1*15:02-DQB1*05:03  India Tamil Nadu 0.00432,492
 43  A*02:01:01-B*18:01:01-C*12:04:02-DRB1*16:01:01-DQB1*05:02:01  Poland BMR 0.003123,595
 44  A*01:01-B*39:01-C*12:04-DRB1*15:01-DQB1*05:02  India Tamil Nadu 0.00292,492
 45  A*01:01-B*39:01-C*12:04-DRB1*15:06-DQB1*05:02  India Tamil Nadu 0.00292,492
 46  A*24:03-B*51:06-C*12:04-DRB1*07:01-DRB4*01:01-DQB1*03:03  USA NMDP Hispanic South or Central American 0.0025146,714
 47  A*02:01-B*18:01-C*12:04-DRB1*15:01  Poland DKMS 0.002420,653
 48  A*24:02-B*51:06-C*12:04-DRB1*11:01-DQB1*03:01  India Tamil Nadu 0.00132,492
 49  A*24:02-B*51:06-C*12:04-DRB1*11:04-DQB1*03:01  India Tamil Nadu 0.00132,492
 50  A*24:02-B*51:06-C*12:04-DRB1*11:06-DQB1*03:01  India Tamil Nadu 0.00132,492
 51  A*24:02-B*51:06-C*12:04-DRB1*11:08-DQB1*03:01  India Tamil Nadu 0.00132,492
 52  A*24:02-B*51:06-C*12:04-DRB1*11:11-DQB1*03:01  India Tamil Nadu 0.00132,492
 53  A*24:03-B*51:06-C*12:04-DRB1*11:01-DQB1*03:01  India Tamil Nadu 0.00132,492
 54  A*24:03-B*51:06-C*12:04-DRB1*11:04-DQB1*03:01  India Tamil Nadu 0.00132,492
 55  A*24:03-B*51:06-C*12:04-DRB1*11:06-DQB1*03:01  India Tamil Nadu 0.00132,492
 56  A*24:03-B*51:06-C*12:04-DRB1*11:08-DQB1*03:01  India Tamil Nadu 0.00132,492
 57  A*24:03-B*51:06-C*12:04-DRB1*11:11-DQB1*03:01  India Tamil Nadu 0.00132,492
 58  A*01:01:01-B*18:01:01-C*12:04:02-DRB1*16:01:01-DQB1*05:02:01  Poland BMR 0.001123,595
 59  A*24:03-B*51:06-C*12:04-DRB1*07:01-DRB4*01:01-DQB1*03:03  USA NMDP South Asian Indian 0.0008850185,391
 60  A*01:01-B*39:01-C*12:04-DRB1*04:01-DQB1*03:02  India Tamil Nadu 0.00075302,492
 61  A*01:01-B*39:01-C*12:04-DRB1*04:04-DQB1*03:02  India Tamil Nadu 0.00075302,492
 62  A*24:03-B*51:06-C*12:04-DRB1*07:01-DRB4*01:01-DQB1*03:03  USA NMDP Mexican or Chicano 0.0006120261,235
 63  A*24:03-B*51:06-C*12:04-DRB1*07:01-DRB4*01:01-DQB1*03:03  USA NMDP Chinese 0.000251099,672
 64  A*24:02-B*40:06-C*12:04-DRB1*01:01-DQB1*05:01  India Tamil Nadu 0.00012502,492
 65  A*24:02-B*40:06-C*12:04-DRB1*01:01-DQB1*05:04  India Tamil Nadu 0.00002602,492
 66  A*24:02-B*40:06-C*12:04-DRB1*01:02-DQB1*05:01  India Tamil Nadu 0.00002602,492
 67  A*24:02-B*39:01-C*12:04-DRB1*14:01-DQB1*06:05  India Tamil Nadu 0.00001742,492
 68  A*24:02-B*39:01-C*12:04-DRB1*14:04-DQB1*06:01  India Tamil Nadu 0.00001742,492
 69  A*24:02-B*39:01-C*12:04-DRB1*14:04-DQB1*06:03  India Tamil Nadu 0.00001742,492
 70  A*24:02-B*39:01-C*12:04-DRB1*14:21-DQB1*06:03  India Tamil Nadu 0.00001742,492
 71  A*24:02-B*39:01-C*12:04-DRB1*14:33-DQB1*06:03  India Tamil Nadu 0.00001742,492
 72  A*24:03-B*39:01-C*12:04-DRB1*14:01-DQB1*06:05  India Tamil Nadu 0.00001742,492
 73  A*24:03-B*39:01-C*12:04-DRB1*14:04-DQB1*06:01  India Tamil Nadu 0.00001742,492
 74  A*24:03-B*39:01-C*12:04-DRB1*14:04-DQB1*06:03  India Tamil Nadu 0.00001742,492
 75  A*24:03-B*39:01-C*12:04-DRB1*14:21-DQB1*06:03  India Tamil Nadu 0.00001742,492
 76  A*24:03-B*39:01-C*12:04-DRB1*14:33-DQB1*06:03  India Tamil Nadu 0.00001742,492
 77  A*24:03-B*51:06-C*12:04-DRB1*07:01-DRB4*01:01-DQB1*03:03  USA NMDP Japanese 0.000011024,582
 78  A*01:01-B*39:01-C*12:04-DRB1*15:01-DQB1*05:01  India Tamil Nadu 0.00000002,492
 79  A*01:01-B*39:01-C*12:04-DRB1*15:01-DQB1*05:03  India Tamil Nadu 0.00000002,492
 80  A*01:01-B*39:01-C*12:04-DRB1*15:02-DQB1*05:01  India Tamil Nadu 0.00000002,492
 81  A*01:01-B*39:01-C*12:04-DRB1*15:02-DQB1*05:02  India Tamil Nadu 0.00000002,492
 82  A*01:01-B*39:01-C*12:04-DRB1*15:04-DQB1*05:02  India Tamil Nadu 0.00000002,492

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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