Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 100 (from 238) records   Pages: 1 2 3 of 3  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*24:02:01-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Amerindians (G) 8.2652125
 2  A*68:30-B*40:02:01-C*03:05-DRB1*16:02:01  Costa Rica Amerindians (G) 6.8548125
 3  A*68:01:02-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Amerindians (G) 6.7860125
 4  B*40:02-C*03:05  Mexico Oaxaca Mixe 3.900055
 5  A*24:02-B*40:02-C*03:05-DRB1*14:02-DQA1*05:03-DQB1*03:01  Mexico Chichen Itza Maya (prehispanic) 3.191547
 6  B*40:02-C*03:05  Mexico Oaxaca Mixtec 3.0000103
 7  A*68:01:02-B*40:02:01-C*03:05-DRB1*14:02  Costa Rica Amerindians (G) 2.2620125
 8  A*24:02:01-B*40:02:01-C*03:05-DRB1*04:07  Nicaragua Mestizo (G) 2.2581155
 9  B*40:02-C*03:05  Mexico Mexico City Mestizo pop 2 2.1300234
 10  A*68:01-B*40:02-C*03:05-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 2.127747
 11  A*24:02:01-B*40:02:01-C*03:05-DRB1*08:02:01-DQB1*04:02:01  Costa Rica Central Valley Mestizo (G) 2.0362221
 12  B*39:06-C*03:05  Mexico Oaxaca Mixtec 2.0000103
 13  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 1.7316339
 14  A*02:01:01-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Amerindians (G) 1.6862125
 15  A*68:01:02-B*40:02:01-C*03:05-DRB1*04:03:01  Nicaragua Mestizo (G) 1.5852155
 16  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 1.492567
 17  A*24:02:01-B*40:02:01-C*03:05-DRB1*16:02:01  Costa Rica Amerindians (G) 1.4645125
 18  A*68:01:02-B*40:02:01-C*03:05-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 1.3575221
 19  A*24:02:01-B*40:02:01-C*03:05-DRB1*08:02:01  Costa Rica Amerindians (G) 1.2833125
 20  A*02:22:01-B*40:02:01-C*03:05-DRB1*16:02:01  Costa Rica Amerindians (G) 1.2097125
 21  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*04:02  Panama 1.1400462
 22  A*24:02:01-B*40:02:01-C*03:05-DRB1*04:07-DQB1*03:01  Costa Rica Central Valley Mestizo (G) 1.1312221
 23  A*31:01:02-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Amerindians (G) 1.0753125
 24  A*02:01-B*40:02-C*03:05-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 25  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 26  A*31:01-B*40:02-C*03:05-DRB1*04:17-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 27  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 28  A*68:03-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 29  B*35:01-C*03:05  Mexico Mexico City Mestizo pop 2 1.0600234
 30  B*40:02-C*03:05  USA Hispanic pop 2 0.97801,999
 31  A*31:01:02-B*40:02:01-C*03:05-DRB1*04:07  Nicaragua Mestizo (G) 0.9677155
 32  A*24:02-B*40:02-C*03:05-DRB1*04:03-DQB1*03:02-DPB1*04:02  Panama 0.9500462
 33  A*24:02:01-B*40:02:01-C*03:05-DRB1*07:01  Costa Rica Guanacaste Mestizo (G) 0.9091110
 34  A*24:02:01-B*40:02:01-C*03:05-DRB1*08:02:01  Costa Rica Guanacaste Mestizo (G) 0.9091110
 35  A*31:01:02-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.9091110
 36  A*68:01:02-B*40:02:01-C*03:05-DRB1*04:03:01-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.9050221
 37  A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.8658339
 38  B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.8600234
 39  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  Colombia Bogotá Cord Blood 0.82111,463
 40  A*02:06:01-B*40:02:01-C*03:05-DRB1*04:03:01  Costa Rica Amerindians (G) 0.8065125
 41  A*02:06:01-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Amerindians (G) 0.8065125
 42  A*02:06:01-B*40:02:01-C*03:05-DRB1*08:02:01  Costa Rica Amerindians (G) 0.8065125
 43  A*24:02-B*35:20-C*03:05-DRB1*04:03-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 44  A*24:02-B*40:02-C*03:05-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 45  A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 46  A*31:01:02-B*40:02:01-C*03:05-DRB1*04:07-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.6787221
 47  A*68:01:02-B*40:02:01-C*03:05-DRB1*04:07  Nicaragua Mestizo (G) 0.6728155
 48  A*02:06:01-B*40:02:01-C*03:05-DRB1*04:07  Nicaragua Mestizo (G) 0.6452155
 49  B*35:01-C*03:05-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.6400234
 50  B*40:02-C*03:05-DRB1*04:04-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.6400234
 51  A*02:17-B*40:02-C*03:05-DRB1*04:11-DRB4*01:01-DQB1*03:02  USA NMDP Caribean Hispanic 0.5963115,374
 52  A*02:01-B*40:02-C*03:05-DRB1*04:03-DQB1*03:02-DPB1*04:02  Panama 0.5700462
 53  A*31:01:02-B*40:02:01-C*03:05-DRB1*11:01  Costa Rica Amerindians (G) 0.5376125
 54  A*02:17-B*40:02-C*03:05-DRB1*04:11-DQB1*03:02  USA NMDP Caribean Indian 0.517014,339
 55  A*30:01:01-B*15:03:01-C*03:05-DRB1*07:01  Costa Rica African -Caribbean (G) 0.4902102
 56  A*02:01:01-B*40:02:01-C*03:05-DRB1*04:03:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 57  A*02:01:01-B*40:02:01-C*03:05-DRB1*13:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 58  A*31:01:02-B*40:02:01-C*03:05-DRB1*14:06:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 59  A*33:03:01-B*40:02:01-C*03:05-DRB1*08:04:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 60  A*68:01:02-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Guanacaste Mestizo (G) 0.4545110
 61  A*68:01:02-B*40:02:01-C*03:05-DRB1*11:02:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 62  A*68:01:02-B*40:02:01-C*03:05-DRB1*14:06:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 63  A*02:22:01-B*40:02:01-C*03:05-DRB1*04:07-DQB1*02:01  Costa Rica Central Valley Mestizo (G) 0.4525221
 64  A*24:02:01-B*40:02:01-C*03:05-DRB1*04:03:01-DQB1*03:02  Costa Rica Central Valley Mestizo (G) 0.4525221
 65  A*68:01:02-B*40:02:01-C*03:05-DRB1*16:02:01  Costa Rica Amerindians (G) 0.4524125
 66  A*24:02-B*40:02-C*03:05-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.4329339
 67  A*68:01-B*35:01-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.4329339
 68  A*24:02-B*40:02-C*03:05-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.43251,463
 69  B*40:02-C*03:05-DRB1*14:02-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.4300234
 70  A*31:01-B*35:01-C*03:05-DRB1*04:07-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4274234
 71  A*31:01-B*40:02-C*03:05-DRB1*04:04-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4274234
 72  A*31:01-B*40:02-C*03:05-DRB1*16:02-DQB1*03:01  Mexico Mexico City Mestizo pop 2 0.4274234
 73  A*24:02:01-B*40:02:01-C*03:05-DRB1*14:02  Costa Rica Amerindians (G) 0.4102125
 74  A*24:02:01-B*40:02:01-C*03:05-DRB1*08:01  Costa Rica Amerindians (G) 0.4080125
 75  A*24:72-B*40:02:01-C*03:05-DRB1*04:07  Costa Rica Amerindians (G) 0.4032125
 76  A*68:01:02-B*40:20-C*03:05-DRB1*08:02:01  Costa Rica Amerindians (G) 0.4032125
 77  A*02:06-B*40:02-C*03:05-DRB1*08:02-DQB1*04:02-DPB1*14:01  Panama 0.3800462
 78  A*24:02-B*40:02-C*03:05-DRB1*04:03-DQB1*03:02-DPB1*04:01  Panama 0.3800462
 79  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*04:01  Panama 0.3800462
 80  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*14:01  Panama 0.3800462
 81  A*24:02-B*40:02-C*03:05-DRB1*16:02-DQB1*03:01-DPB1*04:02  Panama 0.3800462
 82  A*68:01-B*40:02-C*03:05-DRB1*16:02-DQB1*03:01-DPB1*04:02  Panama 0.3800462
 83  A*24:02:01-B*40:02:01-C*03:05-DRB1*03:01  Nicaragua Mestizo (G) 0.3226155
 84  A*24:02:01-B*40:02:01-C*03:05-DRB1*04:03:01  Nicaragua Mestizo (G) 0.3226155
 85  A*24:02:01-B*40:02:01-C*03:05-DRB1*08:02:01  Nicaragua Mestizo (G) 0.3226155
 86  A*24:02:01-B*40:02:01-C*03:05-DRB1*14:02  Nicaragua Mestizo (G) 0.3226155
 87  A*24:02:01-B*40:04-C*03:05-DRB1*04:04:01  Nicaragua Mestizo (G) 0.3226155
 88  A*29:02:01-B*35:01:01-C*03:05-DRB1*11:01  Nicaragua Mestizo (G) 0.3226155
 89  A*30:02:01-B*14:02:01-C*03:05-DRB1*04:04:01  Nicaragua Mestizo (G) 0.3226155
 90  A*68:01:02-B*40:02:01-C*03:05-DRB1*09:01:02  Nicaragua Mestizo (G) 0.3226155
 91  A*68:01:02-B*40:02:01-C*03:05-DRB1*16:02:01  Nicaragua Mestizo (G) 0.3226155
 92  A*31:01:02-B*40:02:01-C*03:05-DRB1*01:01-DQB1*05:01  Costa Rica Central Valley Mestizo (G) 0.3085221
 93  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02  USA NMDP Black South or Central American 0.30624,889
 94  A*02:01-B*48:01-C*03:05-DRB1*14:01-DQB1*05:03  Malaysia Peninsular Chinese 0.2577194
 95  A*24:02-B*56:01-C*03:05-DRB1*14:01-DQB1*05:02  Malaysia Peninsular Chinese 0.2577194
 96  A*24:02-B*40:02-C*03:05-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.25631,463
 97  A*02:22-B*40:02-C*03:05-DRB1*16:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.23891,463
 98  A*02:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 99  A*02:01-B*40:02-C*03:05-DRB1*14:02-DQA1*05:03-DQB1*03:04-DPA1*01:03-DPB1*03:01  Mexico Chiapas Lacandon Mayans 0.2294218
 100  A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:01  Mexico Chiapas Lacandon Mayans 0.2294218

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 238) records   Pages: 1 2 3 of 3  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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