Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Displaying 1 to 100 (from 406) records   Pages: 1 2 3 4 5 of 5  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  B*42:01-C*17:01  Zambia Lusaka 15.100044
 2  B*42:01-C*17:01  Mali Bandiagara 14.0000138
 3  A*30:01-B*42:01  Zambia Lusaka 11.600044
 4  A*30:01-B*42:01-C*17:01  Zambia Lusaka 11.600044
 5  A*30:01-B*42:01  Mali Bandiagara 10.4000138
 6  A*30:01-B*42:01-C*17:01  Mali Bandiagara 10.4000138
 7  B*42:01-C*17:01  Kenya Luo 7.4000265
 8  B*42:01-C*17:01  Kenya Nandi 6.9000240
 9  A*30:01-B*42:01  South Africa Natal Zulu 6.0000100
 10  B*42:01-C*17:01  Uganda Kampala pop 2 6.0000175
 11  B*42:01-C*17:01  USA African American 5.6000252
 12  B*42:01-C*17:01  USA African American pop 4 5.31802,411
 13  A*30:01-B*42:01-C*17:01-DRB1*03:02-DQA1*04:01-DQB1*04:02-DPB1*01:01  Kenya, Nyanza Province, Luo tribe 4.5000100
 14  A*29:02-B*42:01  Zambia Lusaka 3.500044
 15  A*29:02-B*42:01-C*17:01  Zambia Lusaka 3.500044
 16  A*30:01-B*42:01-C*17:01-DRB1*03:02  Brazil Vale do Ribeira Quilombos 3.1250144
 17  A*30:01:01-B*42:01:01-C*17:01:01  South African Mixed ancestry 3.000050
 18  A*30:01-B*42:01  USA African American pop 4 2.96302,411
 19  A*30:01-B*42:01  Kenya Nandi 2.9000240
 20  A*30:01-B*42:01-C*17:01  Kenya Nandi 2.9000240
 21  A*30:01-B*42:01-C*17:01  Morocco Settat Chaouya 2.900098
 22  A*29:02-B*42:01  Kenya Luo 2.6000265
 23  A*29:02-B*42:01-C*17:01  Kenya Luo 2.6000265
 24  A*30:01-B*42:01-C*17:01  USA African American 2.6000252
 25  A*29:02-B*42:01  South Africa Natal Zulu 2.5000100
 26  A*29:02-B*42:01  Kenya Nandi 2.5000240
 27  A*29:02-B*42:01-C*17:01  Kenya Nandi 2.5000240
 28  A*30:01-B*42:01  USA African American 2.5000252
 29  A*30:01:01-B*42:01:01-C*17:01:01-DRB1*03:02:01-DQB1*04:02:01-DPB1*01:01:01  South African Black 2.4650142
 30  A*30:01-B*42:01  Kenya Luo 2.3000265
 31  A*30:01-B*42:01-C*17:01  Kenya Luo 2.1000265
 32  A*29:02:01-B*42:01:01-C*17:01:01  South African Mixed ancestry 2.000050
 33  A*30:01-B*42:01-C*17:01-DRB1*03:02-DQA1*04:01-DQB1*04:02  United Arab Emirates Abu Dhabi 1.920052
 34  A*30:01-B*42:01  Cameroon Yaounde 1.700092
 35  A*30:01-B*42:01-C*17:01-DRB1*03:02-DRB3*01:01-DQB1*04:02  USA NMDP Caribean Black 1.601833,328
 36  A*30:01-B*42:01  Brazil Belo Horizonte Caucasian 1.600095
 37  A*30:01-B*42:01-C*17:01-DRB1*03:02-DQB1*04:02  USA African American pop 4 1.52002,411
 38  A*02:01-B*42:01-C*17:01-DRB1*03:02-DQA1*04:01-DQB1*04:02-DPB1*01:01  Kenya, Nyanza Province, Luo tribe 1.5000100
 39  A*29:02-B*42:01-C*17:01-DRB1*03:02-DQA1*04:01-DQB1*04:02-DPB1*01:01  Kenya, Nyanza Province, Luo tribe 1.5000100
 40  A*66:02-B*42:01  South Africa Natal Zulu 1.5000100
 41  A*30:01-B*42:01-C*17:01-DRB1*03:02-DRB3*01:01-DQB1*04:02  USA NMDP African American pop 2 1.4802416,581
 42  A*01:01:01-B*42:01:01-C*12:03:01-DRB1*03:01:01-DQB1*04:02:01-DPA1*02:02:02-DPB1*04:01:01  Brazil Rio de Janeiro Black 1.470668
 43  A*23:01:01-B*42:01:01-C*02:10:01-DRB1*07:01:01-DQB1*02:02:01-DPA1*02:02:02-DPB1*01:01:01  Brazil Rio de Janeiro Black 1.470668
 44  A*23:01:01-B*42:01:01-C*08:02:01-DRB1*04:05:01-DQB1*04:02:01-DPA1*02:02:02-DPB1*104:01:01  Brazil Rio de Janeiro Black 1.470668
 45  A*30:01:01-B*42:01:01-C*17:01:01-DRB1*03:02:01  Costa Rica African -Caribbean (G) 1.4706102
 46  A*74:01:01-B*42:01:01-C*17:01:01-DRB1*15:03:01-DQB1*06:02:01-DPA1*02:02:02-DPB1*01:01:01  Brazil Rio de Janeiro Black 1.470668
 47  A*02:01-B*42:01  Kenya Luo 1.4000265
 48  A*02:01-B*42:01-C*17:01  Kenya Luo 1.4000265
 49  A*30:01-B*42:01-C*17:01-DRB1*03:02-DRB3*01:01-DQB1*04:02  USA NMDP African 1.357928,557
 50  A*23:01-B*42:01  Mali Bandiagara 1.2000138
 51  A*29:02-B*42:01-C*17:01  Mali Bandiagara 1.2000138
 52  A*32:01:01-B*42:01:01-C*04:01:01-DRB1*04:03:01-DQB1*03:02:01-DPA1*01:03:01-DPB1*01:01:01  Brazil Rio de Janeiro Parda 1.1765170
 53  A*02:01:01-B*42:01-C*17:01-DRB1*15:01  Iran Baloch 1.1000100
 54  A*03:01-B*42:01  Cameroon Yaounde 1.100092
 55  A*03:01-B*42:01  Brazil Belo Horizonte Caucasian 1.100095
 56  A*23:01-B*42:01-C*17:01  Mali Bandiagara 1.1000138
 57  A*30:01-B*42:01-C*17:01-DRB1*03:02-DQB1*04:02  USA NMDP Black South or Central American 1.07044,889
 58  A*23:01-B*42:01-C*17:01-DRB1*03:02  Brazil Vale do Ribeira Quilombos 1.0417144
 59  A*36:01-B*42:01-C*17:01-DRB1*13:01  Brazil Vale do Ribeira Quilombos 1.0417144
 60  A*01:01-B*42:01  South Africa Natal Zulu 1.0000100
 61  A*03:01:01-B*42:01-DRB1*03:02:01  Portugal Center 1.000050
 62  A*23:01-B*42:01-C*17:01-DRB1*10:01-DQA1*01:01-DQB1*05:01-DPB1*17:01  Kenya, Nyanza Province, Luo tribe 1.0000100
 63  A*29:02-B*42:01  Mali Bandiagara 1.0000138
 64  A*02:01:01-B*42:01:01-C*17:01:01-DRB1*03:02:01  Costa Rica African -Caribbean (G) 0.9804102
 65  A*30:01:01-B*42:01:01-C*17:01:01-DRB1*11:01:02  Costa Rica African -Caribbean (G) 0.9804102
 66  A*30:01:01-B*42:01:01-C*04:01:01-DRB1*03:02:01  Costa Rica Guanacaste Mestizo (G) 0.9091110
 67  A*30:01-B*42:01-C*17:01-DRB1*03:02-DQB1*04:02-DPB1*01:01  Tanzania Maasai 0.7987336
 68  A*30:04-B*42:01-DRB1*08:04  Israel YemenJews 0.765015,542
 69  A*74:01-B*42:01-C*17:01-DRB1*03:02  Brazil Vale do Ribeira Quilombos 0.6944144
 70  B*42:01-C*17:01  USA Hispanic pop 2 0.60201,999
 71  A*02:01:01-B*42:01:01-C*16:01:01-DRB1*07:01:01-DQB1*04:02:01-DPA1*02:02:02-DPB1*01:01:01  Brazil Rio de Janeiro Parda 0.5882170
 72  A*23:01:01-B*42:01:01-C*17:01:01-DRB1*11:01:01-DQB1*06:02:01-DPA1*01:03:01-DPB1*01:01:01  Brazil Rio de Janeiro Parda 0.5882170
 73  A*30:01:01-B*42:01:01-C*17:01:01-DRB1*08:04:01-DQB1*03:03:02-DPA1*02:01:01-DPB1*02:01:19  Brazil Rio de Janeiro Parda 0.5882170
 74  A*74:01-B*42:01-DRB1*12:01-DQB1*05:01  Mexico Chihuahua Chihuahua City Pop 2 0.568288
 75  A*30:01-B*42:01-C*17:01-DRB1*03:02-DQB1*04:02  USA NMDP Caribean Indian 0.568014,339
 76  A*30:01-B*42:01-C*17:01-DRB1*03:02-DRB3*01:01-DQB1*04:02  USA NMDP Caribean Hispanic 0.5406115,374
 77  A*23:01-B*42:01  USA African American pop 4 0.51102,411
 78  A*02:01-B*42:01-C*17:01-DRB1*11:01-DQA1*01:02-DQB1*06:02-DPB1*01:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 79  A*23:01-B*42:01-C*02:10-DRB1*11:02-DQA1*02:01-DQB1*02:02-DPB1*01:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 80  A*23:01-B*42:01-C*17:01-DRB1*03:02-DQA1*04:01-DQB1*04:02-DPB1*01:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 81  A*30:02-B*42:01-C*17:01-DRB1*03:02-DQA1*01:02-DQB1*04:02-DPB1*01:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 82  A*34:02-B*42:01-C*17:01-DRB1*03:02-DQA1*04:01-DQB1*04:02-DPB1*04:02  Kenya, Nyanza Province, Luo tribe 0.5000100
 83  A*68:01-B*42:01-C*16:01-DRB1*03:02-DQA1*02:01-DQB1*04:02-DPB1*01:01  Kenya, Nyanza Province, Luo tribe 0.5000100
 84  A*01:01:01-B*42:01:01-C*06:02:01-DRB1*15:03  Costa Rica African -Caribbean (G) 0.4902102
 85  A*30:01:01-B*42:01:01-C*17:01:01-DRB1*07:01  Costa Rica African -Caribbean (G) 0.4902102
 86  A*30:01:01-B*42:01:01-C*17:01:01-DRB1*13:01  Costa Rica African -Caribbean (G) 0.4902102
 87  A*30:01:01-B*42:01:01-C*17:01:01-DRB1*13:03:01  Costa Rica African -Caribbean (G) 0.4902102
 88  A*33:01:01-B*42:01:01-C*17:01:01-DRB1*10:01:01  Costa Rica African -Caribbean (G) 0.4902102
 89  A*68:02:01-B*42:01:01-C*17:01:01-DRB1*03:02:01  Costa Rica African -Caribbean (G) 0.4902102
 90  A*68:02:01-B*42:01:01-C*02:10-DRB1*03:02:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 91  A*30:01-B*42:01-C*17:01-DRB1*03:02-DQA1*04:01-DQB1*04:02-DPB1*01:01  Nicaragua Managua 0.4329339
 92  A*68:02-B*42:01  USA African American pop 4 0.41802,411
 93  A*30:01-B*42:01  USA Hispanic pop 2 0.40101,999
 94  A*02:05:01-B*42:01:01-C*17:01:01-DRB1*03:02:01-DQB1*04:02:01-DPB1*105:01:01  South African Black 0.3520142
 95  A*03:01:01-B*42:01:01-C*17:01:01-DRB1*03:02:01-DQB1*03:19:01-DPB1*131:01  South African Black 0.3520142
 96  A*23:01:01-B*42:01:01-C*07:02:01-DRB1*01:01:01-DQB1*04:02:01-DPB1*55:01:01  South African Black 0.3520142
 97  A*23:01:01-B*42:01:01-C*17:01:01-DRB1*11:02:01-DQB1*03:19:01-DPB1*835:01:01  South African Black 0.3520142
 98  A*29:02:01-B*42:01:01-C*04:01:01-DRB1*07:01:01-DQB1*04:02:01-DPB1*02:01:19  South African Black 0.3520142
 99  A*29:02:01-B*42:01:01-C*17:01:01-DRB1*03:02:01-DQB1*04:02:01-DPB1*01:01:01  South African Black 0.3520142
 100  A*29:02:01-B*42:01:01-C*17:01:01-DRB1*11:02:01-DQB1*03:01:01-DPB1*11:01:01  South African Black 0.3520142

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 406) records   Pages: 1 2 3 4 5 of 5  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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