Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

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Displaying 1 to 100 (from 106) records   Pages: 1 2 of 2  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68:01-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 4.1284218
 2  A*24:02-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.985167
 3  A*31:01-B*40:08-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.985167
 4  A*31:01-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 2.238867
 5  A*68-B*40:08-DRB1*04-DQB1*03:02  Mexico Yucatan Rural 1.1194132
 6  A*24:02-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 7  A*24:02-B*40:08-C*03:04-DRB1*04:11-DQA1*03:03-DQB1*04:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 8  A*24:02-B*40:08-C*03:04-DRB1*14:06-DQA1*05:03-DQB1*03:01  Mexico Chichen Itza Maya (prehispanic) 1.063847
 9  A*68:01-B*40:08-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 10  A*68:01-B*40:08-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 11  A*68:01-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 12  A*68:01-B*40:08-C*03:04-DRB1*14:02-DQA1*05:03-DQB1*03:01  Mexico Chichen Itza Maya (prehispanic) 1.063847
 13  A*68:01-B*40:08-C*03:04-DRB1*16:02-DQA1*05:05-DQB1*03:01  Mexico Chichen Itza Maya (prehispanic) 1.063847
 14  A*31-B*40:08-DRB1*04-DQB1*03:02  Mexico Campeche Rural 1.063847
 15  A*02-B*40:08-DRB1*04-DQB1*03:02  Mexico Chihuahua, Ciudad Juarez 0.9259106
 16  A*68:01-B*40:08-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.9174218
 17  A*68-B*40:08-DRB1*04-DQB1*03:02  Guatemala, Guatemala City Mixed Ancestry 0.7900127
 18  A*68-B*40:08-DRB1*04-DQB1*03:02  Mexico Yucatan, Merida 0.7692192
 19  A*68:03-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 20  A*68:03-B*40:08-C*03:04-DRB1*04:25-DQA1*03:01-DQB1*03:02  Mexico Tixcacaltuyub Maya 0.746367
 21  A*31-B*40:08-DRB1*04-DQB1*03:02  Mexico Tabasco Rural 0.7042142
 22  A*68-B*40:08-DRB1*14-DQB1*03:01  Mexico Guanajuato, Leon 0.641078
 23  A*02-B*40:08-DRB1*04-DQB1*03:02  Mexico Mexico City East 0.625079
 24  A*31-B*40:08-DRB1*04-DQB1*03:02  Mexico Tabasco, Villahermosa 0.609882
 25  A*31-B*40:08-DRB1*14-DQB1*03:01  Mexico Morelos, Cuernavaca 0.609882
 26  A*68-B*40:08-DRB1*04-DQB1*03:01  Mexico Tabasco, Villahermosa 0.609882
 27  A*31-B*40:08-DRB1*08-DQB1*04  Mexico Zacatecas, Zacatecas city 0.595284
 28  B*40:08-C*03:04  USA Hispanic pop 2 0.55201,999
 29  A*02-B*40:08-DRB1*14-DQB1*03:01  Mexico Sinaloa Rural 0.5464183
 30  A*02-B*40:08-DRB1*04-DQB1*03:02  Mexico Yucatan, Merida 0.5128192
 31  A*24-B*40:08-DRB1*04-DQB1*03:02  Mexico Zacatecas, Fresnillo 0.4762103
 32  A*31:01:02-B*40:08-C*03:04:01-DRB1*04:03:01  Costa Rica Guanacaste Mestizo (G) 0.4545110
 33  A*02-B*40:08-DRB1*04-DQB1*03:02  Mexico Chiapas Rural 0.4132121
 34  A*02-B*40:08-DRB1*04-DQB1*03:02  Mexico Mexico City North 0.3984751
 35  A*68-B*40:08-DRB1*13-DQB1*03:01  Guatemala, Guatemala City Mixed Ancestry 0.3900127
 36  A*68-B*40:08-DRB1*14:02-DQB1*03:01  Guatemala, Guatemala City Mixed Ancestry 0.3900127
 37  A*31-B*40:08-DRB1*14-DQB1*03:01  Mexico Tabasco Rural 0.3521142
 38  A*02-B*40:08-DRB1*16-DQB1*03:01  Mexico Mexico City Metropolitan Area Rural 0.3289150
 39  A*68-B*40:08-DRB1*14-DQB1*03:01  Mexico Mexico City Metropolitan Area Rural 0.3289150
 40  A*31-B*40:08-DRB1*08-DQB1*04  Mexico Durango, Durango city 0.3226153
 41  A*02:06:01-B*40:08-C*15:02:01-DRB1*04:04:01  Nicaragua Mestizo (G) 0.3226155
 42  A*68-B*40:08-DRB1*04-DQB1*03:02  Mexico Guanajuato Rural 0.3067162
 43  A*02-B*40:08-DRB1*14-DQB1*03:01  Mexico Durango Rural 0.3058326
 44  A*68-B*40:08-DRB1*08-DQB1*04  Mexico Durango Rural 0.3058326
 45  A*02-B*40:08-DRB1*14-DQB1*03:01  Mexico Mexico City North 0.2656751
 46  A*24-B*40:08-DRB1*04-DQB1*03:02  Mexico Yucatan, Merida 0.2564192
 47  A*24-B*40:08-DRB1*04-DQB1*03:02  Mexico Coahuila, Torreon 0.2500396
 48  A*31:01-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 49  A*68:01-B*40:08-C*03:04-DRB1*04:03-DQA1*04:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 50  A*68:01-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:01  Mexico Chiapas Lacandon Mayans 0.2294218
 51  A*68:01-B*40:08-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*105:01  Mexico Chiapas Lacandon Mayans 0.2294218
 52  A*68:01-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 53  A*68:01-B*40:08-C*03:04-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 54  A*68:01-B*40:08-C*03:04-DRB1*11:04-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 55  A*68-B*40:08-DRB1*04-DQB1*03:02  Mexico Coahuila Rural 0.2294216
 56  A*31-B*40:08-DRB1*14-DQB1*03:01  Mexico Nuevo Leon Rural 0.2273439
 57  A*24:02-B*40:08-C*03:04-DRB1*04:02-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 58  A*24:02-B*40:08-C*06:02-DRB1*07:01-DQA1*02:01-DQB1*03:02-DPB1*02:01  Nicaragua Managua 0.2165339
 59  A*26:01-B*40:08-C*12:03-DRB1*04:02-DQA1*03:01-DQB1*03:02-DPB1*04:01  Nicaragua Managua 0.2165339
 60  A*31:01-B*40:08-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 61  A*31:01-B*40:08-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPB1*04:02  Nicaragua Managua 0.2165339
 62  A*02-B*40:08-DRB1*08-DQB1*04  Ecuador Coast Mixed Ancestry 0.2101238
 63  B*40:08-C*03:04  Mexico Mexico City Mestizo pop 2 0.2100234
 64  A*02-B*40:08-DRB1*04-DQB1*03:02  Mexico Chihuahua Rural 0.2092236
 65  A*24:02-B*40:08-C*07:01-DRB1*04:11-DQB1*03:02-DPB1*04:02  Panama 0.1900462
 66  A*02-B*40:08-DRB1*04-DQB1*03:02  Mexico Zacatecas Rural 0.1859266
 67  A*68-B*40:08-DRB1*14-DQB1*03:01  Mexico Zacatecas Rural 0.1859266
 68  A*68:01-B*40:08  USA Hispanic pop 2 0.18301,999
 69  A*31:01-B*40:08  USA Hispanic pop 2 0.15001,999
 70  A*24-B*40:08-DRB1*04-DQB1*03:02  Mexico Michoacan Rural 0.1433348
 71  A*31:01-B*40:08-C*03:04-DRB1*14:06-DQB1*03:01  USA Hispanic pop 2 0.14001,999
 72  A*31-B*40:08-DRB1*14-DQB1*03:01  Mexico Mexico City North 0.1328751
 73  A*68:01-B*40:08-C*03:04-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.12901,999
 74  A*02-B*40:08-DRB1*08-DQB1*04  Mexico Jalisco, Guadalajara city 0.12561,189
 75  A*68-B*40:08-DRB1*14-DQB1*03:01  Mexico Coahuila, Torreon 0.1250396
 76  A*68-B*40:08-DRB1*14-DQB1*03:02  Mexico Coahuila, Torreon 0.1250396
 77  A*02:06-B*40:08  USA Hispanic pop 2 0.11801,999
 78  A*68-B*40:08-DRB1*08-DQB1*04  Mexico Nuevo Leon Rural 0.1136439
 79  A*68:01-B*40:08-C*03:04-DRB1*04:11-DQB1*03:02  USA Hispanic pop 2 0.09401,999
 80  A*24-B*40:08-DRB1*04-DQB1*03:02  Mexico Veracruz Rural 0.0924539
 81  A*02-B*40:08-DRB1*07-DQB1*02  Mexico Jalisco Rural 0.0853585
 82  A*31-B*40:08-DRB1*04-DQB1*03:02  Mexico Jalisco Rural 0.0853585
 83  A*68-B*40:08-DRB1*04-DQB1*03:02  Mexico Jalisco Rural 0.0853585
 84  A*24-B*40:08-DRB1*04-DQB1*03:02  Mexico Mexico City North 0.0664751
 85  A*31-B*40:08-DRB1*04-DQB1*03:02  Mexico Mexico City North 0.0664751
 86  A*68-B*40:08-DRB1*04-DQB1*03:02  Mexico Mexico City North 0.0664751
 87  A*02-B*40:08-DRB1*04-DQB1*03:01  Mexico Puebla Rural 0.0600833
 88  A*02-B*40:08-DRB1*04-DQB1*03:02  Mexico Puebla Rural 0.0600833
 89  A*68-B*40:08-DRB1*16-DQB1*03:02  Mexico Puebla Rural 0.0600833
 90  A*02:01-B*40:08-C*03:04-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.05801,999
 91  A*02:01-B*40:08  USA Hispanic pop 2 0.05201,999
 92  A*30-B*40:08-DRB1*04-DQB1*03:02  Mexico Puebla, Puebla city 0.05011,994
 93  A*02:01-B*40:08-C*03:04-DRB1*08:02-DQB1*04:02  USA Hispanic pop 2 0.04701,999
 94  A*02:06-B*40:08-C*03:04-DRB1*14:02-DQB1*03:01  USA Hispanic pop 2 0.04701,999
 95  A*11:01-B*40:08-C*03:04-DRB1*04:03-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 96  A*24:25-B*40:08-C*03:04-DRB1*04:03-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 97  A*68:05-B*40:08-C*03:04-DRB1*04:02-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 98  A*02-B*40:08-DRB1*08-DQB1*04  Ecuador Mixed Ancestry 0.04261,173
 99  A*02-B*40:08-DRB1*04-DQB1*03:02  Mexico Jalisco, Guadalajara city 0.04191,189
 100  A*02-B*40:08-DRB1*14-DQB1*03:01  Mexico Jalisco, Guadalajara city 0.04191,189

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).


Displaying 1 to 100 (from 106) records   Pages: 1 2 of 2  


   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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