Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 58 (from 58) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*68:01-B*39:09-C*07:02-DRB1*04:11-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 33.700073
 2  A*68:01-B*39:09-DRB1*08:02-DQB1*04:02  Chile Mapuche 6.150066
 3  A*01:01:01-B*39:09:01-C*01:02:01-DRB1*16:02:01-DQB1*03:01:01-DPA1*01:03:01-DPB1*11:01:01  Brazil Barra Mansa Rio State Black 2.381073
 4  A*32:01:01-B*39:09:01-C*07:02:01-DRB1*08:02:01-DQB1*03:02:01-DPA1*01:03:01-DPB1*04:02:01  Brazil Barra Mansa Rio State Black 2.381073
 5  A*02:01-B*39:09-DRB1*14:02-DQB1*03:01  Chile Mapuche 2.310066
 6  A*02:01-B*39:09-DRB1*16:02-DQB1*03:01  Chile Mapuche 1.540066
 7  A*68:01-B*39:09-DRB1*04:03-DQB1*03:02  Chile Mapuche 1.540066
 8  A*68:01-B*39:09-DRB1*14:02-DQB1*03:01  Chile Mapuche 1.540066
 9  A*68:01-B*39:09-DRB1*16:02-DQB1*03:01  Chile Mapuche 1.540066
 10  A*68:01-B*39:09-C*07:02-DRB1*04:03-DQA1*03:01:01-DQB1*03:02-DPA1*01-DPB1*04:02  Venezuela Sierra de Perija Yucpa 1.200073
 11  A*24:03-B*39:09-C*07:05-DRB1*08:04-DQB1*04:02  Colombia North Chimila Amerindians 1.063847
 12  A*02:01-B*39:09-DRB1*04:02-DQB1*03:02  Chile Mapuche 0.770066
 13  A*02:01-B*39:09-DRB1*04:03-DQB1*03:02  Chile Mapuche 0.770066
 14  A*29:01-B*39:09-DRB1*15:17N-DQB1*03:01  Chile Mapuche 0.770066
 15  A*31:01-B*39:09-DRB1*04:02-DQB1*03:02  Chile Mapuche 0.770066
 16  A*31:01-B*39:09-DRB1*07:01-DQB1*03:03  Chile Mapuche 0.770066
 17  A*68:01-B*39:09-DRB1*15:01-DQB1*03:01  Chile Mapuche 0.770066
 18  A*68:16-B*39:09-DRB1*16:02-DQB1*03:01  Chile Mapuche 0.770066
 19  A*02:03:01-B*39:09:01-C*07:02:01-DRB1*15:02:01-DQB1*05:02:01  Vietnam Kinh 0.4950101
 20  A*02:01-B*39:09-DRB1*04:03-DQB1*03:01  Peru Titikaka Lake Uros 0.4800105
 21  A*02:01-B*39:09-DRB1*08:02-DQB1*03:02  Peru Titikaka Lake Uros 0.4800105
 22  A*02:01:01-B*39:09:01-C*07:02:01-DRB1*14:06:01-DQB1*03:01:01-DPA1*01:03:01-DPB1*04:02:01  Brazil Rio de Janeiro Caucasian 0.1946521
 23  A*02:03-B*39:09-C*07:02-DRB1*15:02-DQB1*05:01  USA Asian pop 2 0.08901,772
 24  A*02:03-B*39:09  USA Asian pop 2 0.08501,772
 25  B*39:09-C*07:02  USA Asian pop 2 0.08501,772
 26  A*02:03:01-B*39:09:01-C*07:02:01-DRB1*04:05:01-DQB1*04:01:01  China Zhejiang Han 0.05771,734
 27  A*02:03:01-B*39:09:01-C*07:02:01-DRB1*04:05:01-DPB1*03:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.04755,266
 28  A*02:03-B*39:09-C*07:02-DRB1*16:02  Germany DKMS - China minority 0.03901,282
 29  A*02:11-B*39:09-C*07:02-DRB1*04:04  Germany DKMS - China minority 0.03901,282
 30  A*11:01-B*39:09-C*07:02-DRB1*15:01  Germany DKMS - China minority 0.03901,282
 31  B*39:09-C*07:02  USA Hispanic pop 2 0.03701,999
 32  A*24:02-B*39:09-C*07:02-DRB1*14:02-DQB1*03:01  Colombia Bogotá Cord Blood 0.03421,463
 33  A*02:22-B*39:09-C*07:02-DRB1*04:04-DQB1*03:02  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 34  A*68:01-B*39:09-C*07:02-DRB1*16:02-DQB1*03:01  Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, 0.03404,335
 35  A*02:03:01-B*39:09:01-C*07:02:01-DRB1*15:01:01-DQB1*06:01:01  China Zhejiang Han 0.02881,734
 36  A*02:03:01-B*39:09:01-C*07:02:01-DRB1*15:01:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02855,266
 37  A*02:01-B*39:09  USA Hispanic pop 2 0.02501,999
 38  A*23:01-B*39:09  USA Hispanic pop 2 0.02501,999
 39  A*02:01-B*39:09-C*07:02-DRB1*04:07-DQB1*03:02  USA Hispanic pop 2 0.02301,999
 40  A*02:01-B*39:09-C*07:02-DRB1*04:11-DQB1*04:02  USA Hispanic pop 2 0.02301,999
 41  A*02:04-B*39:09  USA African American pop 4 0.02102,411
 42  B*39:09-C*07:02  USA African American pop 4 0.02102,411
 43  A*02:03-B*39:09-C*07:02-DRB1*15:01  Hong Kong Chinese BMDR 0.01327,595
 44  B*39:09-C*16:01  USA Hispanic pop 2 0.01301,999
 45  A*30:01-B*39:09-DRB1*15:01  Hong Kong Chinese cord blood registry 0.01273,892
 46  A*24:02-B*39:09-DRB1*15:01  Hong Kong Chinese cord blood registry 0.01263,892
 47  A*02:01-B*39:09-C*07:02-DRB1*04:04-DQB1*03:02  USA Hispanic pop 2 0.01201,999
 48  A*02:01-B*39:09-C*07:02-DRB1*13:03-DQB1*03:01  USA Hispanic pop 2 0.01201,999
 49  A*23:01-B*39:09-C*07:02-DRB1*04:04-DQB1*03:02  USA Hispanic pop 2 0.01201,999
 50  A*23:01-B*39:09-C*07:02-DRB1*13:03-DQB1*03:01  USA Hispanic pop 2 0.01201,999
 51  A*02:03-B*39:09-C*07:02-DRB1*12:02-DQB1*05:02  Germany DKMS - Turkey minority 0.01004,856
 52  A*33:03:01-B*39:09:01-C*07:02:01-DRB1*09:01:02-DPB1*03:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00685,266
 53  A*11:02-B*39:09-C*07:02-DRB1*15:01  Hong Kong Chinese BMDR 0.00637,595
 54  A*24:02-B*39:09-C*07:02-DRB1*15:01  Hong Kong Chinese BMDR 0.00637,595
 55  A*02:03:01-B*39:09:01-C*07:02:01-DRB1*12:01:01-DPB1*02:02:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00585,266
 56  A*02:03-B*39:09-C*07:02-DRB1*16:02  Hong Kong Chinese BMDR 0.00517,595
 57  A*02:03-B*39:09-C*07:02-DRB1*09:01  Hong Kong Chinese BMDR 0.00397,595
 58  B*39:09-C*07:02  China Hubei Han 0.00050003,732

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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